RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 KPTNQ9Y664 436 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 C5orf52A6NGY3 159 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 C9JQL5 133 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 UBE2CO00762 179 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 TIMM8AO60220 97 aaPredicted RBP15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 CRYAAP02489 173 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 FAM27E3Q08E93 113 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 KLRB1Q12918 225 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 RNF212Q495C1 297 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 FAM219AQ8IW50 185 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 FAM58AQ8N1B3 248 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 SCCPDHQ8NBX0 429 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 HS3ST6Q96QI5 342 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 GSKIPQ9P0R6 139 aa15.72■□□□□ 0.11
TSPAN4-212ENST00000494815 IGKV1D-8A0A087WSZ0 117 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 M0R1B8 84 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 ZNF154Q13106 437 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 PDCD1Q15116 288 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 HMGN3Q15651 99 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 BRICD5Q6PL45 260 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 ZNF565Q8N9K5 539 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 HIST1H2BAQ96A08 127 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 CLCC1Q96S66 551 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 JKAMPQ9P055 326 aa15.71■□□□□ 0.11
TSPAN4-212ENST00000494815 SPTA1P02549 2419 aa15.71■□□□□ 0.1
TSPAN4-212ENST00000494815 AGPAT2O15120 278 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 RHBDL1O75783 438 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 HOXB5P09067 269 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 GLRA1P23415 457 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 ID4P47928 161 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 FABP6P51161 128 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 SMCO1Q147U7 214 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 Q6ZRG5 221 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 LYPD6BQ8NI32 183 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 NIT2Q9NQR4 276 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 A0A1B0GWJ7 208 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 SDCBPO00560 298 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 GAPDHP04406 335 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 S100A9P06702 114 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 S100PP25815 95 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 ERVK11-1P61568 191 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 SURF2Q15527 256 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 DYRK2Q92630 601 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 AKR1E2Q96JD6 320 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 ZNF488Q96MN9 340 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 ZNF286AQ9HBT8 521 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 PLA2G2EQ9NZK7 142 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 IL36RNQ9UBH0 155 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 SH3BGRL2Q9UJC5 107 aa15.7■□□□□ 0.1
TSPAN4-212ENST00000494815 C1QTNF9BB2RNN3 333 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 MLNRO43193 412 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 C1QTNF9P0C862 333 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 CCKARP32238 428 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 ECI1P42126 302 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 ETV3LQ6ZN32 361 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 SSX8Q7RTT4 187 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 GTF3AQ92664 365 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 VKORC1Q9BQB6 163 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 CNTNAP3Q9BZ76 1288 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 CXXC4Q9H2H0 198 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 NECAP2Q9NVZ3 263 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 MIOXQ9UGB7 285 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 NCOR2Q9Y618 2525 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 C16orf97H3BN30 126 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 JTBO76095 146 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 PGA5P0DJD9 388 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 ZNF44P15621 663 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 RPL12P30050 165 aaKnown RBP15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 SRSF7Q16629 238 aaKnown RBP eCLIP15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 Q6ZS49 121 aa15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 KDF1Q8NAX2 398 aaPredicted RBP15.69■□□□□ 0.1
TSPAN4-212ENST00000494815 ESPL1Q14674 2120 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 H0YL77 283 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 WRBO00258 174 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 MT-ND4LP03901 98 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 OR8U9P0C7N5 309 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 GLRXP35754 106 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 NKX6-1P78426 367 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 RELQ04864 619 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 AKIRIN2Q53H80 203 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 ALKBH2Q6NS38 261 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 RBMS3Q6XE24 437 aaKnown RBP15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 FOXRED2Q8IWF2 684 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 ZNF561Q8N587 486 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 OR8U1Q8NH10 309 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 RPS10P5Q9NQ39 176 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 C1orf123Q9NWV4 160 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 K7EPK0 472 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 CDIPTO14735 213 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 NAPSAO96009 420 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 OR5H8P0DN80 308 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 AGAP20933 346 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 PPT1P50897 306 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 MZT1Q08AG7 82 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 IGFBP7Q16270 282 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 FAM71E2Q8N5Q1 922 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 SECTM1Q8WVN6 248 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 RND1Q92730 232 aa15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 SEBOXQ9HB31 216 aaPredicted RBP15.68■□□□□ 0.1
TSPAN4-212ENST00000494815 FBXL17Q9UF56 701 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms