RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 MTFP1Q9UDX5 166 aa10.24□□□□□ -0.77
SNX17-208ENST00000493711 ANAPC10Q9UM13 185 aa10.24□□□□□ -0.77
SNX17-208ENST00000493711 INSIG2Q9Y5U4 225 aa10.24□□□□□ -0.77
SNX17-208ENST00000493711 NPIPB11E5RHQ5 1161 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 FABP7O15540 132 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 NAT1P18440 290 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 RCC1P18754 421 aaPredicted RBP10.23□□□□□ -0.77
SNX17-208ENST00000493711 CD40LGP29965 261 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 AP3S2P59780 193 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 ERVFRD-1P60508 538 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 HLA-DRB3P79483 266 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 HTD2P86397 168 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 PAX8Q06710 450 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 LSAMPQ13449 338 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 ZNF273Q14593 569 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 HMGN3Q15651 99 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 Q3ZCU0 254 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 ACTBL2Q562R1 376 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 METTL11BQ5VVY1 283 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 MFSD4AQ8N468 514 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 BEST4Q8NFU0 473 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 OR52I2Q8NH67 350 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 DEDD2Q8WXF8 326 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 MSI2Q96DH6 328 aaKnown RBP10.23□□□□□ -0.77
SNX17-208ENST00000493711 CCDC32Q9BV29 185 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 HEXA-AS1Q9H8Q6 139 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 UNKLQ9H9P5 680 aaKnown RBP10.23□□□□□ -0.77
SNX17-208ENST00000493711 LPAR2Q9HBW0 351 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 ONECUT1Q9UBC0 465 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 ELF5Q9UKW6 265 aaPredicted RBP10.23□□□□□ -0.77
SNX17-208ENST00000493711 MED13LQ71F56 2210 aa10.23□□□□□ -0.77
SNX17-208ENST00000493711 CHD3Q12873 2000 aaKnown RBP10.23□□□□□ -0.77
SNX17-208ENST00000493711 NAV3Q8IVL0 2385 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 MEIOCA2RUB1 952 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 C12orf77C9JDV5 145 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 F2RL2O00254 374 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 SMAD7O15105 426 aaKnown RBP10.22□□□□□ -0.77
SNX17-208ENST00000493711 RGS11O94810 467 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 HBZP02008 142 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 INHBBP09529 407 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 CSF1P09603 554 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 PRTN3P24158 256 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 FPR2P25090 351 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 PPP5CP53041 499 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 DLX6P56179 175 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 ARPC4P59998 168 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 CHRFAM7AQ494W8 412 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 NCR3LG1Q68D85 454 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 TCF23Q7RTU1 214 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 RTN4RL2Q86UN3 420 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 FAM216AQ8WUB2 273 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 TSC22D3Q99576 134 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 THAP7Q9BT49 309 aaPredicted RBP10.22□□□□□ -0.77
SNX17-208ENST00000493711 SRRQ9GZT4 340 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 IDI2-AS1Q9NZ38 188 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 ANXA10Q9UJ72 324 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 RBMX2Q9Y388 322 aaKnown RBP10.22□□□□□ -0.77
SNX17-208ENST00000493711 SESN1Q9Y6P5 492 aa10.22□□□□□ -0.77
SNX17-208ENST00000493711 C15orf65H3BRN8 121 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 CD5LO43866 347 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 TOX4O94842 621 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 PTHLHP12272 177 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 CD99P14209 185 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 HOXB4P17483 251 aaPredicted RBP10.21□□□□□ -0.77
SNX17-208ENST00000493711 ZBTB25P24278 435 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 OR3A3P47888 321 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 INPP1P49441 399 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 ARF6P62330 175 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 DGCR2P98153 550 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 MADCAM1Q13477 382 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 ZNF79Q15937 498 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 C17orf58Q2M2W7 97 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 OXLD1Q5BKU9 147 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 LY6G6FQ5SQ64 297 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 TRIQKQ629K1 86 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 CIARTQ8N365 385 aaPredicted RBP10.21□□□□□ -0.77
SNX17-208ENST00000493711 TMEM229BQ8NBD8 167 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 MAPK1IP1LQ8NDC0 245 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 OR5AP2Q8NGF4 316 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 OR13D1Q8NGV5 346 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 CABLES2Q9BTV7 478 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 SIRPDQ9H106 197 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 MMP26Q9NRE1 261 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 NECAP2Q9NVZ3 263 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 ZNF230Q9UIE0 474 aaPredicted RBP10.21□□□□□ -0.77
SNX17-208ENST00000493711 JPT1Q9UK76 154 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 KCNS2Q9ULS6 477 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 AUP1Q9Y679 476 aa10.21□□□□□ -0.77
SNX17-208ENST00000493711 TRAV39A0A0B4J263 110 aa10.2□□□□□ -0.78
SNX17-208ENST00000493711 ZNF736B4DX44 427 aaPredicted RBP10.2□□□□□ -0.78
SNX17-208ENST00000493711 SDCBPO00560 298 aaPredicted RBP10.2□□□□□ -0.78
SNX17-208ENST00000493711 IGHV1-8P0DP01 117 aa10.2□□□□□ -0.78
SNX17-208ENST00000493711 CCL3L1P16619 93 aa10.2□□□□□ -0.78
SNX17-208ENST00000493711 SSTR5P35346 364 aa10.2□□□□□ -0.78
SNX17-208ENST00000493711 FAUP35544 74 aaKnown RBP10.2□□□□□ -0.78
SNX17-208ENST00000493711 TAS2R19P59542 299 aa10.2□□□□□ -0.78
SNX17-208ENST00000493711 CDK10Q15131 360 aa10.2□□□□□ -0.78
SNX17-208ENST00000493711 FAHD2BQ6P2I3 314 aaPredicted RBP10.2□□□□□ -0.78
SNX17-208ENST00000493711 GVQW1Q8N7I0 195 aa10.2□□□□□ -0.78
SNX17-208ENST00000493711 C8orf31Q8N9H6 132 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms