RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 TCF23Q7RTU1 214 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 VN1R4Q7Z5H5 301 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 MTERF4Q7Z6M4 381 aaKnown RBP1.33□□□□□ -2.2
SMC4-223ENST00000493695 LRRC6Q86X45 466 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 ANGPTL6Q8NI99 470 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 SPPL2BQ8TCT7 592 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 IFT81Q8WYA0 676 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 FBXL15Q9H469 300 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 TMEM106BQ9NUM4 274 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 PSORS1C2Q9UIG4 136 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 CCL26Q9Y258 94 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 DOCK6Q96HP0 2047 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 COL11A1P12107 1806 aaPredicted RBP1.33□□□□□ -2.2
SMC4-223ENST00000493695 PLXNA3P51805 1871 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 STRCP1A6NGW2 1772 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 SLIT2O94813 1529 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 ARGFXA6NJG6 315 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 ODF3BA8MYP8 253 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 EEF1E1O43324 174 aaKnown RBP1.32□□□□□ -2.2
SMC4-223ENST00000493695 SYNGR1O43759 233 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 UGT2B11O75310 529 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 TPM1P09493 284 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 CTSEP14091 401 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 NQO2P16083 231 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 AKR1C4P17516 323 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 CRABP1P29762 137 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 OR2B6P58173 313 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 DEFB103AP81534 67 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 FLOT2Q14254 428 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 SPERTQ8NA61 448 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 SUN5Q8TC36 379 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 C1QTNF6Q9BXI9 259 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 C11orf49Q9H6J7 331 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 KCNIP2Q9NS61 270 aa1.32□□□□□ -2.2
SMC4-223ENST00000493695 GOLGA8QA0A0J9YX86 632 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 LOC102725191A0A1B0GVB3 256 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 H3BSA7 217 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 GPR171O14626 319 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 TP53I11O14683 189 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 PHYHO14832 338 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 LIMS3P0CW19 117 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 LIMS4P0CW20 117 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 GZMHP20718 246 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 BLVRBP30043 206 aaPredicted RBP1.31□□□□□ -2.2
SMC4-223ENST00000493695 MAGEA6P43360 314 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 FAM3AP98173 230 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 RAB31Q13636 194 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 SDIM1Q6ZPB5 146 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 MFSD8Q8NHS3 518 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 GALMQ96C23 342 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 UPK3BQ9BT76 320 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 AICDAQ9GZX7 198 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 CXCL16Q9H2A7 254 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 OR52A5Q9H2C5 316 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 CRB1P82279 1406 aa1.31□□□□□ -2.2
SMC4-223ENST00000493695 TRGV4A0A0C4DH28 118 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 IGSF23A1L1A6 192 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 KLRC4-KLRK1H3BQV0 150 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 YKT6O15498 198 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 S1PR2O95136 353 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 IGHV3-30-3P0DP02 117 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 RBM48Q5RL73 367 aaKnown RBP1.3□□□□□ -2.2
SMC4-223ENST00000493695 HENMT1Q5T8I9 393 aaKnown RBP1.3□□□□□ -2.2
SMC4-223ENST00000493695 EBLN2Q6P2I7 272 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 C17orf78Q8N4C9 275 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 YIPF7Q8N8F6 280 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 DNAAF3Q8N9W5 541 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 OR5D18Q8NGL1 313 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 OR11L1Q8NGX0 322 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 GPR119Q8TDV5 335 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.3□□□□□ -2.2
SMC4-223ENST00000493695 FAM210AQ96ND0 272 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 UGT2B28Q9BY64 529 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 POTEKPQ9BYX7 375 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 BCL2L14Q9BZR8 327 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 METTL17Q9H7H0 456 aaPredicted RBP1.3□□□□□ -2.2
SMC4-223ENST00000493695 HEY1Q9Y5J3 304 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 CACNA1SQ13698 1873 aa1.3□□□□□ -2.2
SMC4-223ENST00000493695 ICE1Q9Y2F5 2266 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 KNCNA6PVL3 124 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 A8MWP6 167 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 FAM25EA8MYX2 175 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 F5H5T6 163 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 LY6LH3BQJ8 138 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 K7ERQ8 282 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 ZNF189O75820 626 aaPredicted RBP1.29□□□□□ -2.2
SMC4-223ENST00000493695 SPAM1P38567 509 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 GABRA4P48169 554 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 SS18Q15532 418 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 USF2Q15853 346 aaPredicted RBP1.29□□□□□ -2.2
SMC4-223ENST00000493695 FAM229BQ4G0N7 80 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 C2orf73Q8N5S3 287 aaPredicted RBP1.29□□□□□ -2.2
SMC4-223ENST00000493695 OR4P4Q8NGL7 312 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 OR4C16Q8NGL9 310 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 CHST5Q9GZS9 411 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 C16orf95Q9H693 158 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 COMMD9Q9P000 198 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 CLUHO75153 1309 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 PTPRJQ12913 1337 aa1.29□□□□□ -2.2
SMC4-223ENST00000493695 MYO9BQ13459 2157 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms