RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 SLC31A2O15432 143 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 CD2P06729 351 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 SERPINA2P20848 420 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 VDAC1P21796 283 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 PSMB8P28062 276 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 SOX6P35712 828 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF93P35789 620 aaPredicted RBP13.57□□□□□ -0.24
COL9A1-210ENST00000493682 F2RL1P55085 397 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 FHL3Q13643 280 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 MPV17LQ2QL34 196 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 DDI2Q5TDH0 399 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF497Q6ZNH5 498 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 CBR4Q8N4T8 237 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 TMEM106AQ96A25 262 aa13.57□□□□□ -0.24
COL9A1-210ENST00000493682 SIRT4Q9Y6E7 314 aaPredicted RBP13.57□□□□□ -0.24
COL9A1-210ENST00000493682 IGF1P05019 195 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 LIMS3P0CW19 117 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 LIMS4P0CW20 117 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF137PP52743 207 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 PPP3R1P63098 170 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF260Q3ZCT1 412 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 Q3ZCU0 254 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 XAF1Q6GPH4 301 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 RPL22L1Q6P5R6 122 aaKnown RBP13.56□□□□□ -0.24
COL9A1-210ENST00000493682 SLC25A48Q6ZT89 311 aaKnown RBP13.56□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF439Q8NDP4 499 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 NEK7Q8TDX7 302 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 KCTD7Q96MP8 289 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 S100A13Q99584 98 aa13.56□□□□□ -0.24
COL9A1-210ENST00000493682 MRPS18AQ9NVS2 196 aaKnown RBP13.56□□□□□ -0.24
COL9A1-210ENST00000493682 PAK1IP1Q9NWT1 392 aaPredicted RBP13.56□□□□□ -0.24
COL9A1-210ENST00000493682 A0A1W2PP11 408 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 C12orf77C9JDV5 145 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 C3orf84H3BNL1 204 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 H3BNX3 289 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 AIPO00170 330 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 TXNL1O43396 289 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 BDKRB2P30411 391 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 VHLP40337 213 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF134P52741 427 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 CT45A1Q5HYN5 189 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 STX19Q8N4C7 294 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 OR11H1Q8NG94 326 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 CT45A3Q8NHU0 189 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 MYOZ3Q8TDC0 251 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF580Q9UK33 172 aa13.55□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF256Q9Y2P7 627 aaPredicted RBP13.55□□□□□ -0.24
COL9A1-210ENST00000493682 RPL36Q9Y3U8 105 aaKnown RBP13.55□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF780AO75290 641 aaPredicted RBP13.54□□□□□ -0.24
COL9A1-210ENST00000493682 GTF2F2P13984 249 aa13.54□□□□□ -0.24
COL9A1-210ENST00000493682 CHATP28329 748 aa13.54□□□□□ -0.24
COL9A1-210ENST00000493682 SLC22A6Q4U2R8 563 aa13.54□□□□□ -0.24
COL9A1-210ENST00000493682 CCDC58Q4VC31 144 aa13.54□□□□□ -0.24
COL9A1-210ENST00000493682 OR10V1Q8NGI7 309 aa13.54□□□□□ -0.24
COL9A1-210ENST00000493682 ORAI1Q96D31 301 aa13.54□□□□□ -0.24
COL9A1-210ENST00000493682 FAM53CQ9NYF3 392 aa13.54□□□□□ -0.24
COL9A1-210ENST00000493682 GNG12Q9UBI6 72 aa13.54□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF107Q9UII5 783 aaPredicted RBP13.54□□□□□ -0.24
COL9A1-210ENST00000493682 TRAPPC2LQ9UL33 140 aa13.54□□□□□ -0.24
COL9A1-210ENST00000493682 SPINT2O43291 252 aa13.53□□□□□ -0.24
COL9A1-210ENST00000493682 OR5H8P0DN80 308 aa13.53□□□□□ -0.24
COL9A1-210ENST00000493682 SLC2A2P11168 524 aaPredicted RBP13.53□□□□□ -0.24
COL9A1-210ENST00000493682 KIAA0141Q14154 515 aaPredicted RBP13.53□□□□□ -0.24
COL9A1-210ENST00000493682 SYT6Q5T7P8 510 aaPredicted RBP13.53□□□□□ -0.24
COL9A1-210ENST00000493682 APH1BQ8WW43 257 aa13.53□□□□□ -0.24
COL9A1-210ENST00000493682 UBE2E2Q96LR5 201 aa13.53□□□□□ -0.24
COL9A1-210ENST00000493682 ZNF184Q99676 751 aaPredicted RBP13.53□□□□□ -0.24
COL9A1-210ENST00000493682 KLK15Q9H2R5 256 aa13.53□□□□□ -0.24
COL9A1-210ENST00000493682 RCC2Q9P258 522 aaKnown RBP13.53□□□□□ -0.24
COL9A1-210ENST00000493682 MCRIP1C9JLW8 97 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 LANCL1O43813 399 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 LY86O95711 162 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 HBZP02008 142 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 OR8U8P0C7N1 319 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 IGFBP3P17936 291 aaPredicted RBP13.52□□□□□ -0.25
COL9A1-210ENST00000493682 PPIFP30405 207 aaKnown RBP13.52□□□□□ -0.25
COL9A1-210ENST00000493682 ETV1P50549 477 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 LSAMPQ13449 338 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 RIPK1Q13546 671 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 TMEM30BQ3MIR4 351 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 OR2G6Q5TZ20 316 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 ASPHD1Q5U4P2 390 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 PRR18Q8N4B5 295 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 OR1N2Q8NGR9 330 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 OR13C5Q8NGS8 318 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 OR4K15Q8NH41 348 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 OR1L1Q8NH94 360 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 CHCHD6Q9BRQ6 235 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 GNB4Q9HAV0 340 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 SPACA1Q9HBV2 294 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 RAB9BQ9NP90 201 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 FGF20Q9NP95 211 aaPredicted RBP13.52□□□□□ -0.25
COL9A1-210ENST00000493682 ETAA1Q9NY74 926 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 WSB1Q9Y6I7 421 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 STAB2Q8WWQ8 2551 aa13.52□□□□□ -0.25
COL9A1-210ENST00000493682 LOC100130705A0A1B0GUX0 176 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 MAGEA13PA6NCF6 341 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 G3V318 75 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 I3L521 148 aa13.51□□□□□ -0.25
COL9A1-210ENST00000493682 MYF6P23409 242 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms