RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 Q499Y3 187 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 C6orf183Q5T699 404 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 DMKNQ6E0U4 476 aaPredicted RBP13.09□□□□□ -0.31
PTPRU-208ENST00000493601 UNQ9370/PRO34162Q6UXP9 181 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 TMEM104Q8NE00 496 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 OR8H1Q8NGG4 311 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 UBALD1Q8TB05 177 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 ORAI1Q96D31 301 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 MRPS24Q96EL2 167 aaKnown RBP13.09□□□□□ -0.31
PTPRU-208ENST00000493601 P2RX4Q99571 388 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 RCC2Q9P258 522 aaKnown RBP13.09□□□□□ -0.31
PTPRU-208ENST00000493601 GNG12Q9UBI6 72 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 TRAPPC2LQ9UL33 140 aa13.09□□□□□ -0.31
PTPRU-208ENST00000493601 MRPS28Q9Y2Q9 187 aaKnown RBP13.09□□□□□ -0.31
PTPRU-208ENST00000493601 IGHV3-43A0A0B4J1X8 118 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 MAGEA13PA6NCF6 341 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 MCRIP1C9JLW8 97 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 RRP9O43818 475 aaKnown RBP13.08□□□□□ -0.32
PTPRU-208ENST00000493601 GPX5O75715 221 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 BAG2O95816 211 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 IGHV3-43DP0DP04 118 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 ZNF137PP52743 207 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 GP2P55259 537 aaKnown RBP13.08□□□□□ -0.32
PTPRU-208ENST00000493601 CD69Q07108 199 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 PNLIPRP3Q17RR3 467 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 CXorf66Q5JRM2 361 aaPredicted RBP13.08□□□□□ -0.32
PTPRU-208ENST00000493601 TRAT1Q6PIZ9 186 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 Q8N9W7 124 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 ST6GALNAC6Q969X2 333 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 TMEM80Q96HE8 168 aa13.08□□□□□ -0.32
PTPRU-208ENST00000493601 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTPRU-208ENST00000493601 TRAV8-7A0A075B6U6 113 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 LINC01548A6NM66 108 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 C12orf77C9JDV5 145 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 H0YHG0 523 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 LALBAP00709 142 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 TAS2R43P59537 309 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 FOXE3Q13461 319 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 GPR50Q13585 617 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 SYT6Q5T7P8 510 aaPredicted RBP13.07□□□□□ -0.32
PTPRU-208ENST00000493601 AWAT2Q6E213 333 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 RAB12Q6IQ22 244 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 C11orf87Q6NUJ2 197 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 SLC25A48Q6ZT89 311 aaKnown RBP13.07□□□□□ -0.32
PTPRU-208ENST00000493601 JAGN1Q8N5M9 183 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 ZNF439Q8NDP4 499 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 SETD9Q8NE22 299 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 OR8U1Q8NH10 309 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 MUL1Q969V5 352 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 RAX2Q96IS3 184 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 PGLYRP3Q96LB9 341 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 S1PR3Q99500 378 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 B9D2Q9BPU9 175 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 RASL11BQ9BPW5 248 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 ETAA1Q9NY74 926 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 CLEC2DQ9UHP7 191 aa13.07□□□□□ -0.32
PTPRU-208ENST00000493601 TRBV5-7A0A0A0MS05 114 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 CCL24O00175 119 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 SLC31A2O15432 143 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 CA11O75493 328 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 RPLP1P05386 114 aaKnown RBP13.06□□□□□ -0.32
PTPRU-208ENST00000493601 RAB25P57735 213 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 RPS11P62280 158 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPRU-208ENST00000493601 TTC23Q5W5X9 447 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 GLIPR1L1Q6UWM5 242 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 CDH26Q8IXH8 852 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 PRR18Q8N4B5 295 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 ZFP41Q8N8Y5 198 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 CYGBQ8WWM9 190 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 OR14A2Q96R54 314 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 PLSCR3Q9NRY6 295 aa13.06□□□□□ -0.32
PTPRU-208ENST00000493601 NBEAL2Q6ZNJ1 2754 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 FAM90A10PA6NDY2 464 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 FAM90A7PA6NKC0 464 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 FAM90A23PA8MXZ1 464 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 HBZP02008 142 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 ELANEP08246 267 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 VDAC1P21796 283 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 SOX6P35712 828 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 DGCR2P98153 550 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 FAM53AQ6NSI3 398 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-208ENST00000493601 GAPTQ8N292 157 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 FAM71E2Q8N5Q1 922 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 RNF152Q8N8N0 203 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 ZNF485Q8NCK3 441 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 OR10V1Q8NGI7 309 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 OR4K15Q8NH41 348 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 DUX3Q96PT4 197 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 DCLRE1BQ9H816 532 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 C8orf4Q9NR00 106 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 PEX16Q9Y5Y5 336 aa13.05□□□□□ -0.32
PTPRU-208ENST00000493601 TENM3Q9P273 2699 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 SC5DO75845 299 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 MGMTP16455 207 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 CAPGP40121 348 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 CDX1P47902 265 aaPredicted RBP13.04□□□□□ -0.32
PTPRU-208ENST00000493601 ST3GAL4Q11206 333 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 DOC2BQ14184 412 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 CT45A1Q5HYN5 189 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 STEAP3Q658P3 488 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms