RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 A0A0A6YYH2 397 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 DNAJC9-AS1A6NH13 148 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 A6NJ64 397 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 POM121CA8CG34 1229 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 F2RL2O00254 374 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 HOXA3O43365 443 aaPredicted RBP6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 GABARAPO95166 117 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 HBZP02008 142 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 GNB3P16520 340 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 BRS3P32247 399 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 TGFBR1P36897 503 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 RPS19P39019 145 aaKnown RBP6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 KIR2DS4P43632 304 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 ALDH3B2P48448 385 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 GNG10P50151 68 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 EFNB2P52799 333 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 PITPNAQ00169 270 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 KIR2DS1Q14954 304 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 SSX2Q16385 188 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 C17orf58Q2M2W7 97 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 CDNFQ49AH0 187 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 UBE2NLQ5JXB2 153 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 ZNF626Q68DY1 528 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 SIGIRRQ6IA17 410 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 Q6YL49 198 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 TCF23Q7RTU1 214 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 TMEM86BQ8N661 226 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 SAMD12Q8N8I0 201 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 OR11H6Q8NGC7 330 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 OR52M1Q8NGK5 317 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 MRPL30Q8TCC3 161 aaKnown RBP6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 ZFAND2BQ8WV99 257 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 RPEQ96AT9 228 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 MALSU1Q96EH3 234 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 KIRREL1Q96J84 757 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 DUX5Q96PT3 197 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 BCL7BQ9BQE9 202 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 DCSTAMPQ9H295 470 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 RAB18Q9NP72 206 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 OR2S2Q9NQN1 319 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 DPM3Q9P2X0 92 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 COMMD3Q9UBI1 195 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 AK3Q9UIJ7 227 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 ADAM30Q9UKF2 790 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 PITPNC1Q9UKF7 332 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 SPATA2Q9UM82 520 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 HILPDAQ9Y5L2 63 aa6.63□□□□□ -1.35
TM4SF1-204ENST00000493348 A0A0A6YYD4 124 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 IGHV3-43A0A0B4J1X8 118 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 MDFIC2A0A1B0GVS7 189 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 FAM25AB3EWG3 89 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 FAM25CB3EWG5 89 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 FAM25GB3EWG6 89 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 C12orf77C9JDV5 145 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 J3QR06 171 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 LDLRAD4O15165 306 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 IGHV3-7P01780 117 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 TFAP2AP05549 437 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 MELTFP08582 738 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 GSTP1P09211 210 aaKnown RBP6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 IGHV3-43DP0DP04 118 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 HIST1H1DP16402 221 aaKnown RBP6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 RCC1P18754 421 aaPredicted RBP6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 TMBIM6P55061 237 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 UBA52P62987 128 aaKnown RBP6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 MADCAM1Q13477 382 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 LRRC75BQ2VPJ9 315 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 HLA-DRB5Q30154 266 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 Q3ZCU0 254 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 PLA1AQ53H76 456 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 ARSJQ5FYB0 599 aaPredicted RBP6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 STEAP3Q658P3 488 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 NR2C2APQ86WQ0 139 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 PRIMA1Q86XR5 153 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 C11orf42Q8N5U0 333 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 DTX3Q8N9I9 347 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 BEND2Q8NDZ0 799 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 OR2AK2Q8NG84 335 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 OR10V1Q8NGI7 309 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 UBALD1Q8TB05 177 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 GCDHQ92947 438 aaPredicted RBP6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 TOMM40LQ969M1 308 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 SSX3Q99909 188 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 MMP28Q9H239 520 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 ZNF286AQ9HBT8 521 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 GFOD1Q9NXC2 390 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 ZNRD1Q9P1U0 126 aa6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 RBM7Q9Y580 266 aaKnown RBP6.62□□□□□ -1.35
TM4SF1-204ENST00000493348 TRAV18A0A075B6X5 111 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 ODF3BA8MYP8 253 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 OOSP1A8MZH6 123 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 TRDCB7Z8K6 153 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 NPIPB11E5RHQ5 1161 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 BUB1B-PAK6H3BSN5 160 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 H3BUX3 64 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 CLDN34H7C241 214 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 RGS5O15539 181 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 MMP23AO75900 390 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 VENTXO95231 258 aa6.61□□□□□ -1.35
TM4SF1-204ENST00000493348 NAPSAO96009 420 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms