RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 CIB1Q99828 191 aa1.78□□□□□ -2.12
VTA1-204ENST00000491881 NXF2Q9GZY0 626 aaKnown RBP1.78□□□□□ -2.12
VTA1-204ENST00000491881 GABARAPL1Q9H0R8 117 aa1.78□□□□□ -2.12
VTA1-204ENST00000491881 C14orf166Q9Y224 244 aaKnown RBP1.78□□□□□ -2.12
VTA1-204ENST00000491881 OTOGQ6ZRI0 2925 aa1.78□□□□□ -2.12
VTA1-204ENST00000491881 MUC2Q02817 5179 aa1.78□□□□□ -2.13
VTA1-204ENST00000491881 BAZ2AQ9UIF9 1905 aaKnown RBP1.78□□□□□ -2.13
VTA1-204ENST00000491881 ADGRG4Q8IZF6 3080 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 PEAK1Q9H792 1746 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 UGGT2Q9NYU1 1516 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 COL1A1P02452 1464 aaPredicted RBP1.77□□□□□ -2.13
VTA1-204ENST00000491881 IGHV3-43A0A0B4J1X8 118 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 A0A0B4J2C4 111 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 MYBPHLA2RUH7 354 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 RBFOX3A6NFN3 312 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 GGTLC3B5MD39 225 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 ZNF878C9JN71 531 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 J3QRE1 110 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 SC5DO75845 299 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 VAPBO95292 243 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 CD8AP01732 235 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 SOD3P08294 240 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 GIMD1P0DJR0 217 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 DNASE1L1P49184 302 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 RAB25P57735 213 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 GUSBP1Q15486 140 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 VAMP3Q15836 100 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 CAVIN4Q5BKX8 364 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 FAHD1Q6P587 224 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 ERICH5Q6P6B1 374 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 ZFP82Q8N141 532 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 ZNF738Q8NE65 137 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 OR8G5Q8NG78 346 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 BLNKQ8WV28 456 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 FMC1Q96HJ9 113 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 APOL4Q9BPW4 351 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 ULBP1Q9BZM6 244 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 DIABLOQ9NR28 239 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 STMN3Q9NZ72 180 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 CUBNO60494 3623 aa1.77□□□□□ -2.13
VTA1-204ENST00000491881 CSMD2Q7Z408 3487 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 SLIT1O75093 1534 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 PPIP5K1Q6PFW1 1433 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 MIA2Q96PC5 1412 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 LOXHD1Q8IVV2 1947 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 PLXNA3P51805 1871 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 NRCAMQ92823 1304 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 OTOGLQ3ZCN5 2332 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 IGKV1D-33P01593 117 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 IGKV1-33P01594 117 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 GTF2F2P13984 249 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 CCNOP22674 350 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 ELK4P28324 431 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 CRABP2P29373 138 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 TNFRSF9Q07011 255 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 ACTL10Q5JWF8 245 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 C3orf22Q8N5N4 141 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 MUC7Q8TAX7 377 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 LGALS14Q8TCE9 139 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 NELFBQ8WX92 580 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 SLC25A44Q96H78 314 aaPredicted RBP1.76□□□□□ -2.13
VTA1-204ENST00000491881 NAP1L5Q96NT1 182 aaPredicted RBP1.76□□□□□ -2.13
VTA1-204ENST00000491881 ZNF436Q9C0F3 470 aaPredicted RBP1.76□□□□□ -2.13
VTA1-204ENST00000491881 SLC25A31Q9H0C2 315 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 POMKQ9H5K3 350 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 PLEKHA1Q9HB21 404 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 RBM12B-AS1Q9P1G2 102 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 NAGKQ9UJ70 344 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 ITPR2Q14571 2701 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 NRAPQ86VF7 1730 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 SDK2Q58EX2 2172 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 PLCH1Q4KWH8 1693 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 ADGRB1O14514 1584 aa1.76□□□□□ -2.13
VTA1-204ENST00000491881 CCDC18Q5T9S5 1454 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 ZNF518AQ6AHZ1 1483 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 SCAPERQ9BY12 1400 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 BRD4O60885 1362 aaPredicted RBP1.75□□□□□ -2.13
VTA1-204ENST00000491881 TTC21AQ8NDW8 1320 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 COL4A6Q14031 1691 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 IGLV10-54A0A075B6I4 117 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 MGAT4DA6NG13 374 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 H3BP45 60 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 PSCAO43653 123 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 SPOPO43791 374 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 MYO1DO94832 1006 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 HLA-AP01891 365 aaKnown RBP1.75□□□□□ -2.13
VTA1-204ENST00000491881 TTPAP49638 278 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 RAB38P57729 211 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 TPBGQ13641 420 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 BCL2A1Q16548 175 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 NXNL2Q5VZ03 156 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 TMEM215Q68D42 235 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 TMPPEQ6ZT21 453 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 TPGS1Q6ZTW0 290 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 LYZL2Q7Z4W2 148 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 C10orf107Q8IVU9 208 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 CCL17Q92583 94 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 TRIB3Q96RU7 358 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 HIGD2AQ9BW72 106 aa1.75□□□□□ -2.13
VTA1-204ENST00000491881 HINT2Q9BX68 163 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms