RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 DTX1Q86Y01 620 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 RPS4Y2Q8TD47 263 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 GINS3Q9BRX5 216 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 SIRT7Q9NRC8 400 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 LSM2Q9Y333 95 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 LGALS7P47929 136 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 TAS2R45P59539 299 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 R3HDM4Q96D70 268 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 SOX7Q9BT81 388 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 LPAR5Q9H1C0 372 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 PPIAL4CA0A0B4J2A2 164 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 K7N7A8 449 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 TRAPPC2P0DI81 140 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 TRAPPC2BP0DI82 140 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 PPIAL4GP0DN37 164 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 PHYHD1Q5SRE7 291 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 LRRC75AQ8NAA5 344 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 TMED6Q8WW62 240 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 ZNRF4Q8WWF5 429 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 PTX4Q96A99 478 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 NEIL1Q96FI4 390 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 C20orf24Q9BUV8 137 aa12.35□□□□□ -0.43
ARHGEF39-205ENST00000490638 SMAD7O15105 426 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 SFT2D2O95562 160 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 CTSDP07339 412 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 H2AFB1P0C5Y9 115 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 CD300CQ08708 224 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 SPINK9Q5DT21 86 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 OR2T6Q8NHC8 308 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 MEGF10Q96KG7 1140 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 HBZP02008 142 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 ZNF154Q13106 437 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 GLDNQ6ZMI3 551 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 ETV3LQ6ZN32 361 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 TBC1D26Q86UD7 250 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 RBPMSQ93062 196 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 LHX4Q969G2 390 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 NMES1Q9C002 83 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 RCL1Q9Y2P8 373 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 CDKN1AP38936 164 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 NPBWR2P48146 333 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 TMUB2Q71RG4 321 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 GGNQ86UU5 652 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 KLHDC3Q9BQ90 382 aa12.34□□□□□ -0.43
ARHGEF39-205ENST00000490638 TAAR5O14804 337 aa12.33□□□□□ -0.43
ARHGEF39-205ENST00000490638 PIN1P1O15428 100 aa12.33□□□□□ -0.43
ARHGEF39-205ENST00000490638 FOXG1P55316 489 aaPredicted RBP12.33□□□□□ -0.43
ARHGEF39-205ENST00000490638 TMEM182Q6ZP80 229 aaPredicted RBP12.33□□□□□ -0.43
ARHGEF39-205ENST00000490638 FRZBQ92765 325 aa12.33□□□□□ -0.43
ARHGEF39-205ENST00000490638 SLC2A9Q9NRM0 540 aa12.33□□□□□ -0.43
ARHGEF39-205ENST00000490638 TMEM106BQ9NUM4 274 aa12.33□□□□□ -0.43
ARHGEF39-205ENST00000490638 IGHV3-72A0A0B4J1Y9 119 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 FOXH1O75593 365 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 NQO2P16083 231 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 PSMB3P49720 205 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 BPIFB3P59826 476 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 OR2B8PP59922 312 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 C1orf100Q5SVJ3 147 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 FDX2Q6P4F2 183 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 KCNRGQ8N5I3 272 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 MIXL1Q9H2W2 232 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 LOC390937A0A1W2PQ73 354 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 SCAF4O95104 1147 aaKnown RBP12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 ONECUT2O95948 504 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 SURF2Q15527 256 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 TEX29Q8N6K0 151 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 HSD17B10Q99714 261 aaKnown RBP12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 LOC105371242A0A075B767 164 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 RAB29O14966 203 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 DUS4LO95620 317 aaKnown RBP12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 COX5AP20674 150 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 KIR2DL2P43627 348 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 KCNMB1Q16558 191 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 GGNBP1Q5YKI7 109 aa12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 ZCCHC24Q8N2G6 241 aaKnown RBP12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 NEU4Q8WWR8 484 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF39-205ENST00000490638 ARG1P05089 322 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 VDAC1P21796 283 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 SOHLH1Q5JUK2 328 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 ZNRF1Q8ND25 227 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 ZDHHC11Q9H8X9 412 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 KCNK7Q9Y2U2 307 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 C9orf170A2RU37 121 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 COX7A2P2O60397 106 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 C1QBP02746 253 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 FCGR3AP08637 254 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 RCC1P18754 421 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 RAB40CQ96S21 281 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 COA4Q9NYJ1 87 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 PUS1Q9Y606 427 aaKnown RBP eCLIP12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 ADAP1O75689 374 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 GOSR1O95249 250 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 GAPDHP04406 335 aaKnown RBP12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 PTGDSP41222 190 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 HTD2P86397 168 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 ACOT6Q3I5F7 207 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 FAM201AQ5SY85 155 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 DCAF12L2Q5VW00 463 aa12.32□□□□□ -0.44
ARHGEF39-205ENST00000490638 OR52L2PQ8NGH6 319 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms