RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 AMMECR1Q9Y4X0 333 aaPredicted RBP14□□□□□ -0.17
MDC1-206ENST00000489540 KIAA2026Q5HYC2 2103 aa14□□□□□ -0.17
MDC1-206ENST00000489540 OOSP1A8MZH6 123 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 LY6LH3BQJ8 138 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 F2RL2O00254 374 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 MDKP21741 143 aaPredicted RBP13.99□□□□□ -0.17
MDC1-206ENST00000489540 BRS3P32247 399 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 RAB13P51153 203 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 OR10A3P58181 314 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 UTF1Q5T230 341 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 C6orf201Q7Z4U5 140 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 DTX3Q8N9I9 347 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 SULT4A1Q9BR01 284 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 C16orf95Q9H693 158 aa13.99□□□□□ -0.17
MDC1-206ENST00000489540 MBNL3Q9NUK0 354 aaKnown RBP13.99□□□□□ -0.17
MDC1-206ENST00000489540 CLPSL1A2RUU4 121 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 C12orf77C9JDV5 145 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 HAX1O00165 279 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 SDCBPO00560 298 aaPredicted RBP13.98□□□□□ -0.17
MDC1-206ENST00000489540 LDLRAD4O15165 306 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 TSPAN9O75954 239 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 CD36P16671 472 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 RCC1P18754 421 aaPredicted RBP13.98□□□□□ -0.17
MDC1-206ENST00000489540 Q3ZCU0 254 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 TPTE2P1Q5T6R2 138 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 OLFML2AQ68BL7 652 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 CCDC144NLQ6NUI1 221 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 C8orf31Q8N9H6 132 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 OR56B1Q8NGI3 324 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 LEAP2Q969E1 77 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 OR51E2Q9H255 320 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 RIMS4Q9H426 269 aaPredicted RBP13.98□□□□□ -0.17
MDC1-206ENST00000489540 GFOD1Q9NXC2 390 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 HSF4Q9ULV5 492 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 TCF19Q9Y242 345 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 A0A0A6YYD4 124 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 A6NDX4 124 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 SOCS1O15524 211 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 IGHV3-7P01780 117 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 HBZP02008 142 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 LOXL3P58215 753 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 SHISA2Q6UWI4 295 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 Q6ZSV7 163 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 MRPL30Q8TCC3 161 aaKnown RBP13.98□□□□□ -0.17
MDC1-206ENST00000489540 KCTD7Q96MP8 289 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 ZNF696Q9H7X3 374 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 TAF9BQ9HBM6 251 aa13.98□□□□□ -0.17
MDC1-206ENST00000489540 TMEM272A0A1B0GTI8 110 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 NOTOA8MTQ0 251 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 MNDAP41218 407 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 VEGFCP49767 419 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 MADCAM1Q13477 382 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 Q6ZTK2 550 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 LINC00311Q8N616 119 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 OR10X1Q8NGY0 326 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 LINC01006Q8NI28 216 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 UBALD1Q8TB05 177 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 PTX4Q96A99 478 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 RPEQ96AT9 228 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 CHCHD6Q9BRQ6 235 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 NPFFR1Q9GZQ6 430 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 LIN7BQ9HAP6 207 aa13.97□□□□□ -0.17
MDC1-206ENST00000489540 FOXI3A8MTJ6 420 aaPredicted RBP13.96□□□□□ -0.18
MDC1-206ENST00000489540 RAB6AP20340 208 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 GADD45AP24522 165 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 GNG10P50151 68 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 TMEM50BP56557 158 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 TIMM50Q3ZCQ8 353 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 CCBE1Q6UXH8 406 aaPredicted RBP13.96□□□□□ -0.18
MDC1-206ENST00000489540 PRR18Q8N4B5 295 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 OR1L1Q8NH94 360 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 OCSTAMPQ9BR26 566 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 RANBP3Q9H6Z4 567 aaPredicted RBP13.96□□□□□ -0.18
MDC1-206ENST00000489540 CHMP1AQ9HD42 196 aaPredicted RBP13.96□□□□□ -0.18
MDC1-206ENST00000489540 GNG12Q9UBI6 72 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 RNF114Q9Y508 228 aa13.96□□□□□ -0.18
MDC1-206ENST00000489540 TRBV6-6A0A0A6YYG2 114 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 LOC100506127A0A0U1RQW1 187 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 METTL21EPA6NDL7 271 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 NAPSAO96009 420 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 JUNBP17275 347 aaPredicted RBP13.95□□□□□ -0.18
MDC1-206ENST00000489540 KIR2DS4P43632 304 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 RAB7AP51149 207 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 HTD2P86397 168 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 STEAP3Q658P3 488 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 NR2C2APQ86WQ0 139 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 OR4C13Q8NGP0 309 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 TOMM40LQ969M1 308 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 GALMQ96C23 342 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 ARHGAP5-AS1Q96IT6 56 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 CYYR1Q96J86 154 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 OR2S2Q9NQN1 319 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 ABRACLQ9P1F3 81 aa13.95□□□□□ -0.18
MDC1-206ENST00000489540 IGHV3-43A0A0B4J1X8 118 aa13.94□□□□□ -0.18
MDC1-206ENST00000489540 CHST1O43916 411 aa13.94□□□□□ -0.18
MDC1-206ENST00000489540 IGHV3-43DP0DP04 118 aa13.94□□□□□ -0.18
MDC1-206ENST00000489540 SDC2P34741 201 aa13.94□□□□□ -0.18
MDC1-206ENST00000489540 ZNF880Q6PDB4 577 aa13.94□□□□□ -0.18
MDC1-206ENST00000489540 MOB1BQ7L9L4 216 aa13.94□□□□□ -0.18
MDC1-206ENST00000489540 PECRQ9BY49 303 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms