RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 ZNF497Q6ZNH5 498 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 C17orf107Q6ZR85 190 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 Q6ZS49 121 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 MOB1BQ7L9L4 216 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 TMED4Q7Z7H5 227 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 ZNF554Q86TJ5 538 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 AKAP14Q86UN6 197 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 LHFPL1Q86WI0 220 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 C1orf87Q8N0U7 546 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 ZDHHC22Q8N966 263 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 TERB2Q8NHR7 220 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 PPP1R35Q8TAP8 253 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 MARCH1Q8TCQ1 289 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 MRGPRFQ96AM1 343 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 CCDC140Q96MF4 163 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 NEURL2Q9BR09 285 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 SEC22CQ9BRL7 303 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 OR51J1Q9H342 316 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 GHITMQ9H3K2 345 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 SEBOXQ9HB31 216 aaPredicted RBP6.45□□□□□ -1.38
SMC6-209ENST00000489535 CBLN4Q9NTU7 201 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 ZNF222Q9UK12 451 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 TRAPPC2LQ9UL33 140 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 VSIG4Q9Y279 399 aa6.45□□□□□ -1.38
SMC6-209ENST00000489535 PPIAL4EA0A075B759 164 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 IGHV1-69-2A0A0G2JMI3 117 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 KIR2DS1A0A191URI9 304 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 A0A1W2PPR1 153 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 OOEPA6NGQ2 149 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 OR5H14A6NHG9 310 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 NKX6-3A6NJ46 265 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 PPIAL4DF5H284 164 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 TMEM178BH3BS89 294 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 BET1O15155 118 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 FABP7O15540 132 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 ZNF737O75373 536 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 CCNKO75909 580 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 GYPAP02724 150 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 IL5P05113 134 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 SCTP09683 121 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 RNF224P0DH78 156 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 TRAPPC2P0DI81 140 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 TRAPPC2BP0DI82 140 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 PPIAL4FP0DN26 164 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 PGAM2P15259 253 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 MUC1P15941 1255 aaPredicted RBP6.44□□□□□ -1.38
SMC6-209ENST00000489535 RCC1P18754 421 aaPredicted RBP6.44□□□□□ -1.38
SMC6-209ENST00000489535 KIR2DS4P43632 304 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 SEC61A1P61619 476 aaKnown RBP6.44□□□□□ -1.38
SMC6-209ENST00000489535 AESQ08117 197 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 EDDM3AQ14507 147 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 KIR2DS1Q14954 304 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 IGSF11Q5DX21 431 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 KRBOX4Q5JUW0 171 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 AADACL3Q5VUY0 350 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 TEX36Q5VZQ5 186 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 C11orf71Q6IPW1 123 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 SLC36A1Q7Z2H8 476 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 GAPTQ8N292 157 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 ZNF561Q8N587 486 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 DEFB108BQ8NET1 73 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 OR52B4Q8NGK2 314 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 OR4A4PQ8NGN8 299 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 OR6F1Q8NGZ6 308 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 ANGPTL6Q8NI99 470 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 CAPSLQ8WWF8 208 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 COQ2Q96H96 371 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 SNX22Q96L94 193 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 SCGB3A2Q96PL1 93 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 GAFA1Q96PS6 74 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 FXYD6Q9H0Q3 95 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 RAB1BQ9H0U4 201 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 MED28Q9H204 178 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 ZNF665Q9H7R5 613 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 UBTD1Q9HAC8 227 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 GPN1Q9HCN4 374 aaPredicted RBP6.44□□□□□ -1.38
SMC6-209ENST00000489535 TMEM106BQ9NUM4 274 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 ZNF69Q9UC07 566 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 KIF25Q9UIL4 384 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 RALYQ9UKM9 306 aaKnown RBP6.44□□□□□ -1.38
SMC6-209ENST00000489535 MGAT4AQ9UM21 535 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 PPIAL4AQ9Y536 164 aa6.44□□□□□ -1.38
SMC6-209ENST00000489535 ARHGAP32A7KAX9 2087 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 MEIKINA0A087WXM9 373 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 TRAV38-1A0A0B4J264 116 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 A0A1B0GW55 424 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 A6NNC1 897 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 A8MV72 311 aaPredicted RBP6.43□□□□□ -1.38
SMC6-209ENST00000489535 LGALS8O00214 317 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 MGST3O14880 152 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 SSNA1O43805 119 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 CREBL2O60519 120 aaPredicted RBP6.43□□□□□ -1.38
SMC6-209ENST00000489535 CD8AP01732 235 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 HNRNPCP07910 306 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMC6-209ENST00000489535 OR4E1P0C645 316 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 DANCRP0C864 163 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 DUX4L2P0CJ85 424 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 DUX4L3P0CJ86 424 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 DUX4L4P0CJ87 422 aa6.43□□□□□ -1.38
SMC6-209ENST00000489535 DUX4L5P0CJ88 424 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms