RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 LTAP01374 205 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 CTSEP14091 401 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 AGTR1P30556 359 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 IFNGR2P38484 337 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 SULT1A2P50226 295 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 ZCWPW2Q504Y3 356 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 SPATA31B1PQ5VZV4 182 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 PTRHD1Q6GMV3 140 aaKnown RBP2.35□□□□□ -2.03
XRN1-213ENST00000489241 CPNE9Q8IYJ1 553 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 KCTD4Q8WVF5 259 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 TNFAIP8L1Q8WVP5 186 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 KCTD7Q96MP8 289 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 OR2D2Q9H210 308 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 MS4A6AQ9H2W1 248 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 SPANXB1Q9NS25 103 aaPredicted RBP2.35□□□□□ -2.03
XRN1-213ENST00000489241 USE1Q9NZ43 259 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 TMEM216Q9P0N5 145 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 ZNF492Q9P255 531 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.35□□□□□ -2.03
XRN1-213ENST00000489241 TRAPPC1Q9Y5R8 145 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 DNMT1P26358 1616 aaKnown RBP2.35□□□□□ -2.03
XRN1-213ENST00000489241 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 ARGFXA6NJG6 315 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 ARL6IP5O75915 188 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 KLHL2O95198 593 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 GPR75O95800 540 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 OCM2P0CE71 109 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 INAFM2P0DMQ5 153 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 CD99P14209 185 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 MLLT11Q13015 90 aaPredicted RBP2.34□□□□□ -2.03
XRN1-213ENST00000489241 CCDC122Q5T0U0 273 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 PRR9Q5T870 116 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 EBLN2Q6P2I7 272 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 DOLPP1Q86YN1 238 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 YIPF7Q8N8F6 280 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 FER1L6-AS1Q8NA97 138 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 OR5K1Q8NHB7 308 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 SPPL2BQ8TCT7 592 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 SLC37A2Q8TED4 501 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 OR2V2Q96R30 315 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 SPZ1Q9BXG8 430 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 ARL6Q9H0F7 186 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 UBQLN4Q9NRR5 601 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 FAM206AQ9NX38 181 aa2.34□□□□□ -2.03
XRN1-213ENST00000489241 MYO3BQ8WXR4 1341 aa2.34□□□□□ -2.04
XRN1-213ENST00000489241 ADCY9O60503 1353 aa2.34□□□□□ -2.04
XRN1-213ENST00000489241 TICRRQ7Z2Z1 1910 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 F5H5T6 163 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 H3BMM0 161 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 STX10O60499 249 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 CFL1P23528 166 aaKnown RBP2.33□□□□□ -2.04
XRN1-213ENST00000489241 ANP32AP39687 249 aaKnown RBP2.33□□□□□ -2.04
XRN1-213ENST00000489241 BLVRAP53004 296 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 KLF3P57682 345 aaPredicted RBP2.33□□□□□ -2.04
XRN1-213ENST00000489241 MYL6P60660 151 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 TRMT12Q53H54 448 aaKnown RBP2.33□□□□□ -2.04
XRN1-213ENST00000489241 MESTQ5EB52 335 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 PDZD11Q5EBL8 140 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 COQ5Q5HYK3 327 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 ZFAND6Q6FIF0 208 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 SCGB1D4Q6XE38 83 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 CYHR1Q6ZMK1 362 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 RPRMLQ8N4K4 120 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 C3orf22Q8N5N4 141 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 ZNF680Q8NEM1 530 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 OR1P1Q8NH06 330 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 APOBEC3DQ96AK3 386 aaPredicted RBP2.33□□□□□ -2.04
XRN1-213ENST00000489241 UBE2WQ96B02 151 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 GALMQ96C23 342 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 DHRS9Q9BPW9 319 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 PARD6GQ9BYG4 376 aaPredicted RBP2.33□□□□□ -2.04
XRN1-213ENST00000489241 MROQ9BYG7 248 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 GLS2Q9UI32 602 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 BRWD3Q6RI45 1802 aa2.33□□□□□ -2.04
XRN1-213ENST00000489241 KIF26AQ9ULI4 1882 aaPredicted RBP2.33□□□□□ -2.04
XRN1-213ENST00000489241 A0A0B4J2C4 111 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 IGKV1-12A0A0C4DH73 117 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 A6NED7 52 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 B4DEV8 164 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 M0QZ92 97 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 IGKV1D-12P01611 117 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 GYPCP04921 128 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 C8orf88P0DMB2 117 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 CTLA4P16410 223 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 PSMA1P25786 263 aaKnown RBP2.32□□□□□ -2.04
XRN1-213ENST00000489241 MIPP30301 263 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 CD79BP40259 229 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 GABARAPL2P60520 117 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 RPS11P62280 158 aaKnown RBP eCLIP2.32□□□□□ -2.04
XRN1-213ENST00000489241 IL15RAQ13261 267 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 ZNF660Q6AZW8 331 aaPredicted RBP2.32□□□□□ -2.04
XRN1-213ENST00000489241 Q6ZRU5 148 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 ZBTB8OSQ8IWT0 167 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 TMEM75Q8N9X5 138 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 C1orf64Q8NEQ6 169 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 OR11G2Q8NGC1 345 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 ASB13Q8WXK3 278 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 PACRGQ96M98 296 aaPredicted RBP2.32□□□□□ -2.04
XRN1-213ENST00000489241 GTSF1LQ9H1H1 148 aa2.32□□□□□ -2.04
XRN1-213ENST00000489241 C11orf49Q9H6J7 331 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms