RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 MUC4Q99102 2169 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 TRAV24A0A0B4J272 114 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 C13orf42A0A1B0GVH6 325 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 LOC107986453A0A1B0GWG9 222 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 IZUMO1RA6ND01 250 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 SLC31A2O15432 143 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 NBR2O15453 112 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 TRGV3P03979 118 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 UBCP0CG48 685 aaKnown RBP7.03□□□□□ -1.28
COL17A1-207ENST00000488320 MED14OSP0DP75 135 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 DBTP11182 482 aaKnown RBP7.03□□□□□ -1.28
COL17A1-207ENST00000488320 VHLP40337 213 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 KCNJ3P48549 501 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 SYNJ2BPP57105 145 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 LSAMPQ13449 338 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 PLGLAQ15195 96 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 LRRC36Q1X8D7 754 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 C5orf64Q2M2E5 130 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 UNQ5815/PRO19632Q6UWF5 114 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 UTS2BQ765I0 119 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 TCEANCQ8N8B7 351 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 C8orf31Q8N9H6 132 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 RITA1Q96K30 269 aa7.03□□□□□ -1.28
COL17A1-207ENST00000488320 THAP7Q9BT49 309 aaPredicted RBP7.03□□□□□ -1.28
COL17A1-207ENST00000488320 CNOT2Q9NZN8 540 aaKnown RBP7.03□□□□□ -1.28
COL17A1-207ENST00000488320 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 A0A0J9YWU9 116 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 METTL15A6NJ78 407 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 OR11H12B2RN74 326 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 GNGT2O14610 69 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 KLF5Q13887 457 aaPredicted RBP7.02□□□□□ -1.29
COL17A1-207ENST00000488320 TMEM244Q5VVB8 128 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 ZNF660Q6AZW8 331 aaPredicted RBP7.02□□□□□ -1.29
COL17A1-207ENST00000488320 PPP1R27Q86WC6 154 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 PRSS35Q8N3Z0 413 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 OR13C9Q8NGT0 318 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 UTP4Q969X6 686 aaKnown RBP7.02□□□□□ -1.29
COL17A1-207ENST00000488320 TMEM106AQ96A25 262 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 SLA2Q9H6Q3 261 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 GNG12Q9UBI6 72 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 DHDHQ9UQ10 334 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 FBXO7Q9Y3I1 522 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 NUBP2Q9Y5Y2 271 aa7.02□□□□□ -1.29
COL17A1-207ENST00000488320 TMEM30CPA0ZSE6 113 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 C15orf65H3BRN8 121 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 CST1P01037 141 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 CSN3P07498 182 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 CD7P09564 240 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 ZNF134P52741 427 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 CX3CL1P78423 397 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 ZSCAN26Q16670 478 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 FAM98BQ52LJ0 330 aaKnown RBP7.01□□□□□ -1.29
COL17A1-207ENST00000488320 CT45A1Q5HYN5 189 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 IL34Q6ZMJ4 242 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 SSX6Q7RTT6 188 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 BCDIN3DQ7Z5W3 292 aaKnown RBP7.01□□□□□ -1.29
COL17A1-207ENST00000488320 SUMF2Q8NBJ7 301 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 LFNGQ8NES3 379 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 OR10V1Q8NGI7 309 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 OR2K2Q8NGT1 345 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 CT45A3Q8NHU0 189 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 RDH12Q96NR8 316 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 OVOL2Q9BRP0 275 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 FAM103A1Q9BTL3 118 aaKnown RBP7.01□□□□□ -1.29
COL17A1-207ENST00000488320 DPCDQ9BVM2 203 aaPredicted RBP7.01□□□□□ -1.29
COL17A1-207ENST00000488320 WFDC10AQ9H1F0 79 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 MAGIXQ9H6Y5 334 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 ADGRL4Q9HBW9 690 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 SLC23A1Q9UHI7 598 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 ABCA13Q86UQ4 5058 aa7.01□□□□□ -1.29
COL17A1-207ENST00000488320 A0A0G2JLM5 398 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 SPINT2O43291 252 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 LANCL1O43813 399 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 ORC5O43913 435 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 MITFO75030 526 aaPredicted RBP7□□□□□ -1.29
COL17A1-207ENST00000488320 NDUFB8O95169 186 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 TFAP2AP05549 437 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 PRDX6P30041 224 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 ZNF137PP52743 207 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 CRIP2P52943 208 aaPredicted RBP7□□□□□ -1.29
COL17A1-207ENST00000488320 NDPQ00604 133 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 PAX5Q02548 391 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 GK3PQ14409 553 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 IL13RA2Q14627 380 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 GUCA2BQ16661 112 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 Q3ZCU0 254 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 AKIRIN2Q53H80 203 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 C19orf54Q5BKX5 351 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 CD200R1LQ6Q8B3 271 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 FAM220AQ7Z4H9 259 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 PRR18Q8N4B5 295 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 NPBQ8NG41 125 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 OR13C3Q8NGS6 347 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 NEK7Q8TDX7 302 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 CLCC1Q96S66 551 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 GPER1Q99527 375 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 FBXL15Q9H469 300 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 RAB9BQ9NP90 201 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 PEMTQ9UBM1 199 aa7□□□□□ -1.29
COL17A1-207ENST00000488320 GNG8Q9UK08 70 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms