RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 A0A1W2PPE2 198 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 A0A1W2PR64 198 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 A0A1W2PRV1 198 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 IFNA2P01563 188 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 HIST1H1DP16402 221 aaKnown RBP13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 LOXL3P58215 753 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 SLC9A3R2Q15599 337 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 CDNFQ49AH0 187 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 ZNF880Q6PDB4 577 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 Q6YL49 198 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 CMSS1Q9BQ75 279 aaKnown RBP13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 CLEC7AQ9BXN2 247 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 MBNL3Q9NUK0 354 aaKnown RBP13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 SCOCQ9UIL1 159 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 PSG11Q9UQ72 335 aa13.89□□□□□ -0.19
SHROOM1-205ENST00000488072 SDCBPO00560 298 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 EIF4EP06730 217 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 SSX2Q16385 188 aa13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 PTX4Q96A99 478 aa13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 PARP12Q9H0J9 701 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 PRDM13Q9H4Q3 707 aa13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 GFOD1Q9NXC2 390 aa13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 COMMD3Q9UBI1 195 aa13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 FAM96BQ9Y3D0 163 aa13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 HILPDAQ9Y5L2 63 aa13.88□□□□□ -0.19
SHROOM1-205ENST00000488072 FBN1P35555 2871 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 TMEM235A6NFC5 223 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 F2RL2O00254 374 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 ORC5O43913 435 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 IGLV1-47P01700 117 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 FCER2P06734 321 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 SCTP09683 121 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 CD3GP09693 182 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 GZMHP20718 246 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 CD34P28906 385 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 ZNF134P52741 427 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 UBA52P62987 128 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 SAMD12Q8N8I0 201 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 NUDCD2Q8WVJ2 157 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 Q9N2K0 584 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 SPATA2Q9UM82 520 aa13.87□□□□□ -0.19
SHROOM1-205ENST00000488072 TRAV18A0A075B6X5 111 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 A0A087X0M5 115 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 IGKV1-6A0A0C4DH72 117 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 A0A1B0GX30 115 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 METTL21EPA6NDL7 271 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 SSX5O60225 188 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 CA11O75493 328 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 CD24P25063 80 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 LGALS4P56470 323 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 BPIFB3P59826 476 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 HMGN3Q15651 99 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 LY6EQ16553 131 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 ZNF260Q3ZCT1 412 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 MIDNQ504T8 468 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 RBMS3Q6XE24 437 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 USP43Q70EL4 1123 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 PIFOQ8TCI5 191 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 GCDHQ92947 438 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 CHIAQ9BZP6 476 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 ABRACLQ9P1F3 81 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 OR1A1Q9P1Q5 309 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 ETV7Q9Y603 341 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 ATRQ13535 2644 aa13.86□□□□□ -0.19
SHROOM1-205ENST00000488072 H3BMQ9 156 aa13.85□□□□□ -0.19
SHROOM1-205ENST00000488072 J3QR06 171 aa13.85□□□□□ -0.19
SHROOM1-205ENST00000488072 HPGDSO60760 199 aa13.85□□□□□ -0.19
SHROOM1-205ENST00000488072 IER3P46695 156 aa13.85□□□□□ -0.19
SHROOM1-205ENST00000488072 FAM189A2Q15884 450 aa13.85□□□□□ -0.19
SHROOM1-205ENST00000488072 HLA-DRB5Q30154 266 aa13.85□□□□□ -0.19
SHROOM1-205ENST00000488072 C6orf183Q5T699 404 aa13.85□□□□□ -0.19
SHROOM1-205ENST00000488072 IL1F10Q8WWZ1 152 aa13.85□□□□□ -0.19
SHROOM1-205ENST00000488072 ISOC1Q96CN7 298 aa13.85□□□□□ -0.19
SHROOM1-205ENST00000488072 TRBV6-6A0A0A6YYG2 114 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 LY6LH3BQJ8 138 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 TOR1AO14656 332 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 FCGR3AP08637 254 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 FBP1P09467 338 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 GSTT2P0CG29 244 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 GSTT2BP0CG30 244 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 RORCP51449 518 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 HLA-DRB3P79483 266 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 ARFRP1Q13795 201 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 HERPUD1Q15011 391 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 CT45A1Q5HYN5 189 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 OR52W1Q6IF63 320 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 LDLRAD3Q86YD5 345 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 ZNF439Q8NDP4 499 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 BEND2Q8NDZ0 799 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 OR9G1Q8NH87 305 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 CT45A3Q8NHU0 189 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 SSX3Q99909 188 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 RBM38Q9H0Z9 239 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 C12orf4Q9NQ89 552 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 KCNIP1Q9NZI2 227 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 GNG12Q9UBI6 72 aa13.84□□□□□ -0.19
SHROOM1-205ENST00000488072 MEIS3P1A6NDR6 274 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 BUB1B-PAK6H3BSN5 160 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms