RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 NAP1L5Q96NT1 182 aaPredicted RBP1.32□□□□□ -2.2
PTEN-204ENST00000487939 PRSS27Q9BQR3 290 aa1.32□□□□□ -2.2
PTEN-204ENST00000487939 SMDT1Q9H4I9 107 aa1.32□□□□□ -2.2
PTEN-204ENST00000487939 TENM1Q9UKZ4 2725 aa1.32□□□□□ -2.2
PTEN-204ENST00000487939 COL4A2P08572 1712 aa1.32□□□□□ -2.2
PTEN-204ENST00000487939 CRB1P82279 1406 aa1.32□□□□□ -2.2
PTEN-204ENST00000487939 IGKV1-12A0A0C4DH73 117 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 FABP7O15540 132 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 SHOX2O60902 331 aaPredicted RBP1.31□□□□□ -2.2
PTEN-204ENST00000487939 IGKV1D-12P01611 117 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 CD164Q04900 197 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 PAFAH1B3Q15102 231 aaKnown RBP1.31□□□□□ -2.2
PTEN-204ENST00000487939 N4BP2L1Q5TBK1 243 aaPredicted RBP1.31□□□□□ -2.2
PTEN-204ENST00000487939 Q6ZT83 130 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 OR9I1Q8NGQ6 314 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 OR4X1Q8NH49 305 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 IFT81Q8WYA0 676 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 OR52B2Q96RD2 323 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 GOLPH3Q9H4A6 298 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 HAUS4Q9H6D7 363 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 SCML1Q9UN30 329 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 CHTOPQ9Y3Y2 248 aaKnown RBP1.31□□□□□ -2.2
PTEN-204ENST00000487939 MINOS1-NBL1R4GNA1 71 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 PTPRJQ12913 1337 aa1.31□□□□□ -2.2
PTEN-204ENST00000487939 YLPM1P49750 1951 aaKnown RBP1.3□□□□□ -2.2
PTEN-204ENST00000487939 HELZ2Q9BYK8 2649 aaKnown RBP1.3□□□□□ -2.2
PTEN-204ENST00000487939 TRPM3Q9HCF6 1732 aaPredicted RBP1.3□□□□□ -2.2
PTEN-204ENST00000487939 H0YC42 278 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 BOLA2-SMG1P6H3BVE0 249 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 K7EQS6 105 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 CRXO43186 299 aaPredicted RBP1.3□□□□□ -2.2
PTEN-204ENST00000487939 VN1R4Q7Z5H5 301 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 ZBTB8OSQ8IWT0 167 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 FAM45AQ8TCE6 357 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 PGLYRP3Q96LB9 341 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 EBNA1BP2Q99848 306 aaKnown RBP1.3□□□□□ -2.2
PTEN-204ENST00000487939 FBXL15Q9H469 300 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 PSMD13Q9UNM6 376 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 FIS1Q9Y3D6 152 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 USP42Q9H9J4 1324 aaKnown RBP1.3□□□□□ -2.2
PTEN-204ENST00000487939 MPDZO75970 2070 aa1.3□□□□□ -2.2
PTEN-204ENST00000487939 GBF1Q92538 1859 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 B4DEV8 164 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 H3BSA7 217 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 GPX1P07203 203 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 CD36P16671 472 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 ATF1P18846 271 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 PSMA1P25786 263 aaKnown RBP1.29□□□□□ -2.2
PTEN-204ENST00000487939 GABARAPL2P60520 117 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 MAPK14Q16539 360 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 FAM229BQ4G0N7 80 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 HES3Q5TGS1 186 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 EBLN2Q6P2I7 272 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 SELENOHQ8IZQ5 122 aaKnown RBP1.29□□□□□ -2.2
PTEN-204ENST00000487939 TRIML2Q8N7C3 387 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 ZNF625Q96I27 306 aaPredicted RBP1.29□□□□□ -2.2
PTEN-204ENST00000487939 CATSPER2Q96P56 530 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 Q9BRP9 147 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 C11orf49Q9H6J7 331 aa1.29□□□□□ -2.2
PTEN-204ENST00000487939 KMT2BQ9UMN6 2715 aaPredicted RBP1.29□□□□□ -2.2
PTEN-204ENST00000487939 ATG2BQ96BY7 2078 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 RAB19A4D1S5 217 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 C8orf87E5RJ46 101 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 J3QLI3 93 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 IGHV3-30-3P0DP02 117 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 SKP2Q13309 424 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 BSXQ3C1V8 233 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 MRPS24Q96EL2 167 aaKnown RBP1.28□□□□□ -2.2
PTEN-204ENST00000487939 HINT2Q9BX68 163 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 NDUFB11Q9NX14 153 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 TAS2R13Q9NYV9 303 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 CLEC2DQ9UHP7 191 aa1.28□□□□□ -2.2
PTEN-204ENST00000487939 IGLV3-9A0A075B6K5 115 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 CYTH3O43739 400 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 EPPINO95925 133 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 CTSEP14091 401 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 BSPH1Q075Z2 132 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 PDK2Q15119 407 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 MRPL52Q86TS9 123 aaKnown RBP1.27□□□□□ -2.21
PTEN-204ENST00000487939 ST13P4Q8IZP2 240 aaPredicted RBP1.27□□□□□ -2.21
PTEN-204ENST00000487939 OR10A6Q8NH74 314 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 ZNF563Q8TA94 476 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 C16orf78Q8WTQ4 265 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 MRAP2Q96G30 205 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 MND1Q9BWT6 205 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 RAB1BQ9H0U4 201 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 XKR8Q9H6D3 395 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 IFT46Q9NQC8 304 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 ALG5Q9Y673 324 aa1.27□□□□□ -2.21
PTEN-204ENST00000487939 PXDNLA1KZ92 1463 aa1.26□□□□□ -2.21
PTEN-204ENST00000487939 RTEL1-TNFRSF6BF6WH68 1400 aa1.26□□□□□ -2.21
PTEN-204ENST00000487939 IGHV3-73A0A0B4J1V6 119 aa1.26□□□□□ -2.21
PTEN-204ENST00000487939 A0A0G2JQZ4 141 aa1.26□□□□□ -2.21
PTEN-204ENST00000487939 VPS37CA5D8V6 355 aaPredicted RBP1.26□□□□□ -2.21
PTEN-204ENST00000487939 SOD1P00441 154 aa1.26□□□□□ -2.21
PTEN-204ENST00000487939 ANGP03950 147 aaKnown RBP1.26□□□□□ -2.21
PTEN-204ENST00000487939 NUP62P37198 522 aaPredicted RBP1.26□□□□□ -2.21
PTEN-204ENST00000487939 CD200P41217 278 aa1.26□□□□□ -2.21
PTEN-204ENST00000487939 AQP5P55064 265 aa1.26□□□□□ -2.21
PTEN-204ENST00000487939 SLC35A2P78381 396 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms