RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 PITPNC1Q9UKF7 332 aa13.7□□□□□ -0.22
HMG20B-212ENST00000487894 TRAPPC2LQ9UL33 140 aa13.7□□□□□ -0.22
HMG20B-212ENST00000487894 AMMECR1Q9Y4X0 333 aaPredicted RBP13.7□□□□□ -0.22
HMG20B-212ENST00000487894 V9GY05 133 aa13.7□□□□□ -0.22
HMG20B-212ENST00000487894 TRAV1-2A0A0B4J238 106 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 RCC1P18754 421 aaPredicted RBP13.69□□□□□ -0.22
HMG20B-212ENST00000487894 LOXL3P58215 753 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 FBLN7Q53RD9 439 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 C6orf183Q5T699 404 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 C22orf42Q6IC83 251 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 FAM53AQ6NSI3 398 aaPredicted RBP13.69□□□□□ -0.22
HMG20B-212ENST00000487894 C6orf201Q7Z4U5 140 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 OR51D1Q8NGF3 324 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 OR52M1Q8NGK5 317 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 OR4C13Q8NGP0 309 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 NEDD4LQ96PU5 975 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 MBNL3Q9NUK0 354 aaKnown RBP13.69□□□□□ -0.22
HMG20B-212ENST00000487894 GFOD1Q9NXC2 390 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 FBLN5Q9UBX5 448 aa13.69□□□□□ -0.22
HMG20B-212ENST00000487894 IGHV3-43A0A0B4J1X8 118 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 A0A1W2PPE3 182 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 OOSP1A8MZH6 123 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 SDCBPO00560 298 aaPredicted RBP13.68□□□□□ -0.22
HMG20B-212ENST00000487894 IGHV3-43DP0DP04 118 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 MYL9P24844 172 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 OR10A3P58181 314 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 HES5Q5TA89 166 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 TRAT1Q6PIZ9 186 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 TOMM40LQ969M1 308 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 FAM3DQ96BQ1 224 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 CITED1Q99966 193 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 NPFFR1Q9GZQ6 430 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 STEAP1Q9UHE8 339 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 SIGLEC9Q9Y336 463 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 VWFP04275 2813 aa13.68□□□□□ -0.22
HMG20B-212ENST00000487894 FOXI3A8MTJ6 420 aaPredicted RBP13.67□□□□□ -0.22
HMG20B-212ENST00000487894 PDCD5O14737 125 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 LDLRAD4O15165 306 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 SOCS1O15524 211 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 HBZP02008 142 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 CD24P25063 80 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 BLVRBP30043 206 aaPredicted RBP13.67□□□□□ -0.22
HMG20B-212ENST00000487894 BRS3P32247 399 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 KIR2DS4P43632 304 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 PSMD7P51665 324 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 EFNB2P52799 333 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 DIAPH2-AS1Q14236 149 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 FAM89BQ8N5H3 189 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 OR1L1Q8NH94 360 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 SGMS2Q8NHU3 365 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 RPEQ96AT9 228 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 URM1Q9BTM9 101 aaKnown RBP13.67□□□□□ -0.22
HMG20B-212ENST00000487894 FAAP24Q9BTP7 215 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 ZNF702PQ9H963 129 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 TXNL4BQ9NX01 149 aaKnown RBP13.67□□□□□ -0.22
HMG20B-212ENST00000487894 STUB1Q9UNE7 303 aa13.67□□□□□ -0.22
HMG20B-212ENST00000487894 TET2Q6N021 2002 aaPredicted RBP13.67□□□□□ -0.22
HMG20B-212ENST00000487894 TMEM272A0A1B0GTI8 110 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 A0A1W2PPI3 338 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 SPINT2O43291 252 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 RAB3BP20337 219 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 FGF9P31371 208 aaPredicted RBP13.66□□□□□ -0.22
HMG20B-212ENST00000487894 ARHGDIBP52566 201 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 PLA2G7Q13093 441 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 MADCAM1Q13477 382 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 C2orf76Q3KRA6 126 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 TMEM30BQ3MIR4 351 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 CCDC144NLQ6NUI1 221 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 Q6ZPA2 131 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 C5orf24Q7Z6I8 188 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 ZNF554Q86TJ5 538 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 NR2C2APQ86WQ0 139 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 PRR18Q8N4B5 295 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 LINC00311Q8N616 119 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 C8orf31Q8N9H6 132 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 ZNF439Q8NDP4 499 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 OR10X1Q8NGY0 326 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 TAF9BQ9HBM6 251 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 RAB9BQ9NP90 201 aa13.66□□□□□ -0.22
HMG20B-212ENST00000487894 IFITM5A6NNB3 132 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 SLC31A2O15432 143 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 NAPSAO96009 420 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 MNDAP41218 407 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 NEDD8Q15843 81 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 Q3ZCU0 254 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 OR2T6Q8NHC8 308 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 CFHR4Q92496 578 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 OR51E2Q9H255 320 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 PLEKHJ1Q9NW61 149 aa13.65□□□□□ -0.22
HMG20B-212ENST00000487894 SMIM30A4D0T7 59 aa13.64□□□□□ -0.23
HMG20B-212ENST00000487894 HSD17B6O14756 317 aa13.64□□□□□ -0.23
HMG20B-212ENST00000487894 TIMM23O14925 209 aa13.64□□□□□ -0.23
HMG20B-212ENST00000487894 RANBP1P43487 201 aa13.64□□□□□ -0.23
HMG20B-212ENST00000487894 VEGFCP49767 419 aa13.64□□□□□ -0.23
HMG20B-212ENST00000487894 RAB7AP51149 207 aa13.64□□□□□ -0.23
HMG20B-212ENST00000487894 TMEM50BP56557 158 aa13.64□□□□□ -0.23
HMG20B-212ENST00000487894 ZNF816Q0VGE8 651 aaPredicted RBP13.64□□□□□ -0.23
HMG20B-212ENST00000487894 HABP2Q14520 560 aaPredicted RBP13.64□□□□□ -0.23
HMG20B-212ENST00000487894 GNMTQ14749 295 aa13.64□□□□□ -0.23
HMG20B-212ENST00000487894 HMGN3Q15651 99 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms