RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TRPM3Q9HCF6 1732 aaPredicted RBP1.42□□□□□ -2.18
LTN1-206ENST00000486427 MYO9BQ13459 2157 aa1.42□□□□□ -2.18
LTN1-206ENST00000486427 LCTP09848 1927 aa1.42□□□□□ -2.18
LTN1-206ENST00000486427 PTPRKQ15262 1439 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 FADS2O95864 444 aaKnown RBP1.41□□□□□ -2.18
LTN1-206ENST00000486427 AKR1C4P17516 323 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 ETV1P50549 477 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 ZNF140P52738 457 aaPredicted RBP1.41□□□□□ -2.18
LTN1-206ENST00000486427 SKP2Q13309 424 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 PAFAH1B3Q15102 231 aaKnown RBP1.41□□□□□ -2.18
LTN1-206ENST00000486427 FBXO48Q5FWF7 155 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 OR10J3Q5JRS4 329 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 OR9I1Q8NGQ6 314 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 RORBQ92753 470 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 GTF2H4Q92759 462 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 CCDC124Q96CT7 223 aaKnown RBP1.41□□□□□ -2.18
LTN1-206ENST00000486427 DDIT4LQ96D03 193 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 SERPINB11Q96P15 392 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 HBEGFQ99075 208 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 BCL2L14Q9BZR8 327 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 AICDAQ9GZX7 198 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 AGPAT3Q9NRZ7 376 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 ENPP5Q9UJA9 477 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 KIAA0232Q92628 1395 aa1.41□□□□□ -2.18
LTN1-206ENST00000486427 USP42Q9H9J4 1324 aaKnown RBP1.4□□□□□ -2.18
LTN1-206ENST00000486427 CRB1P82279 1406 aa1.4□□□□□ -2.18
LTN1-206ENST00000486427 LOC102725191A0A1B0GVB3 256 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 ODF3BA8MYP8 253 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 F5H5T6 163 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 CRTAPO75718 401 aaPredicted RBP1.4□□□□□ -2.19
LTN1-206ENST00000486427 BRI3O95415 125 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 ARL14EPLP0DKL9 152 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 FLOT2Q14254 428 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 SDIM1Q6ZPB5 146 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 COPS6Q7L5N1 327 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 OR5C1Q8NGR4 320 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 SUN5Q8TC36 379 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 GPR119Q8TDV5 335 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 TMIGD2Q96BF3 282 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 POTEKPQ9BYX7 375 aa1.4□□□□□ -2.19
LTN1-206ENST00000486427 DNMT1P26358 1616 aaKnown RBP1.4□□□□□ -2.19
LTN1-206ENST00000486427 MYO5BQ9ULV0 1848 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 IGSF23A1L1A6 192 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 A8MWP6 167 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 ZNF879B4DU55 563 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 GPR171O14626 319 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 TPM1P09493 284 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 SLC35E2BP0CK96 405 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 CTSEP14091 401 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 BLVRBP30043 206 aaPredicted RBP1.39□□□□□ -2.19
LTN1-206ENST00000486427 OR4D1Q15615 310 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 Q6ZSA8 131 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 VN1R4Q7Z5H5 301 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 OR5D18Q8NGL1 313 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 OR4C16Q8NGL9 310 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 GALMQ96C23 342 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 C11orf49Q9H6J7 331 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 TAS2R9Q9NYW1 312 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 HEY1Q9Y5J3 304 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 SLIT2O94813 1529 aa1.39□□□□□ -2.19
LTN1-206ENST00000486427 NUP153P49790 1475 aaKnown RBP1.38□□□□□ -2.19
LTN1-206ENST00000486427 COL4A2P08572 1712 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 LY6LH3BQJ8 138 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 ZNF189O75820 626 aaPredicted RBP1.38□□□□□ -2.19
LTN1-206ENST00000486427 GP1BAP07359 652 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 NQO2P16083 231 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 MAGEA6P43360 314 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 OR2B6P58173 313 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 TSPAN31Q12999 210 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 RAB31Q13636 194 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 TMEM249Q2WGJ8 235 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 TMEM176BQ3YBM2 270 aaPredicted RBP1.38□□□□□ -2.19
LTN1-206ENST00000486427 EBLN2Q6P2I7 272 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 MTERF4Q7Z6M4 381 aaKnown RBP1.38□□□□□ -2.19
LTN1-206ENST00000486427 OR11L1Q8NGX0 322 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 ANGPTL6Q8NI99 470 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 CAPZA3Q96KX2 299 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 UPK3BQ9BT76 320 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 CXCL16Q9H2A7 254 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 PSORS1C2Q9UIG4 136 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 WASHC3Q9Y3C0 194 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 HELZ2Q9BYK8 2649 aaKnown RBP1.38□□□□□ -2.19
LTN1-206ENST00000486427 ADAMTSL1Q8N6G6 1762 aa1.38□□□□□ -2.19
LTN1-206ENST00000486427 PLXNA3P51805 1871 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 CACNA1SQ13698 1873 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 STRCP1A6NGW2 1772 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 KNCNA6PVL3 124 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 UGT2B11O75310 529 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 SNAP29O95721 258 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 LIMS3P0CW19 117 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 LIMS4P0CW20 117 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 ATF1P18846 271 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 GABRA3P34903 492 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 GABRA4P48169 554 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 HADHBP55084 474 aaKnown RBP1.37□□□□□ -2.19
LTN1-206ENST00000486427 BSPH1Q075Z2 132 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 HTR4Q13639 388 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 SS18Q15532 418 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 FAM229BQ4G0N7 80 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 ACSBG2Q5FVE4 666 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms