RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ZNF205O95201 554 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 LHBP01229 141 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 MMP9P14780 707 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 FAM27E3Q08E93 113 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 SP6Q3SY56 376 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 NMSQ5H8A3 153 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 PRAMEF6Q5VXH4 476 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 EIF5AL1Q6IS14 154 aaKnown RBP10.05□□□□□ -0.8
PKP4-213ENST00000486254 ZNF826PQ6ZT77 177 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 LYZL2Q7Z4W2 148 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 COMMD7Q86VX2 200 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 BAP18Q8IXM2 172 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 TCTEX1D1Q8N7M0 179 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 OR2Z1Q8NG97 314 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 LHFPL5Q8TAF8 219 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 FAM222BQ8WU58 562 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 LRRC29Q8WV35 223 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 TAF9BQ9HBM6 251 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 GSKIPQ9P0R6 139 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 IL19Q9UHD0 177 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 UBE2J1Q9Y385 318 aaPredicted RBP10.05□□□□□ -0.8
PKP4-213ENST00000486254 POMT1Q9Y6A1 747 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 TLN1Q9Y490 2541 aaKnown RBP10.05□□□□□ -0.8
PKP4-213ENST00000486254 ZFHX4Q86UP3 3567 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 hCG_1807616A0A1W2PRN6 198 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 ATP6V1G2-DDX39BF2Z307 99 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 K7EPK0 472 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 MBPP02686 304 aaPredicted RBP10.05□□□□□ -0.8
PKP4-213ENST00000486254 HKR1P10072 659 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 P2RY1P47900 373 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 S100A10P60903 97 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 SNTB1Q13884 538 aaKnown RBP10.05□□□□□ -0.8
PKP4-213ENST00000486254 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 HSD17B13Q7Z5P4 300 aaPredicted RBP10.05□□□□□ -0.8
PKP4-213ENST00000486254 ZNF695Q8IW36 515 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 SELENOHQ8IZQ5 122 aaKnown RBP10.05□□□□□ -0.8
PKP4-213ENST00000486254 GALMQ96C23 342 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 COQ2Q96H96 371 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 RAB9BQ9NP90 201 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 NGBQ9NPG2 151 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 CCL28Q9NRJ3 127 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 CYTL1Q9NRR1 136 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 LIN7CQ9NUP9 197 aaKnown RBP10.05□□□□□ -0.8
PKP4-213ENST00000486254 ASF1BQ9NVP2 202 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 POLEQ07864 2286 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 CFAP47Q6ZTR5 3102 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 MFSD2BA6NFX1 497 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 MSGN1A6NI15 193 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 WNT9BO14905 357 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 CD55P08174 381 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 TNFSF4P23510 183 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 RPL12P30050 165 aaKnown RBP10.04□□□□□ -0.8
PKP4-213ENST00000486254 HTD2P86397 168 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 IGFBP7Q16270 282 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 FBXL19-AS1Q494R0 122 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 GCSAMQ8N6F7 178 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 RND1Q92730 232 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 LSM10Q969L4 123 aaKnown RBP10.04□□□□□ -0.8
PKP4-213ENST00000486254 SNX22Q96L94 193 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 OR2V2Q96R30 315 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 CITED4Q96RK1 184 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 C11orf1Q9H5F2 150 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 OR14J1Q9UGF5 321 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 PFDN2Q9UHV9 154 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 DUSP13Q9UII6 198 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 ERRFI1Q9UJM3 462 aaPredicted RBP10.04□□□□□ -0.8
PKP4-213ENST00000486254 FZR1Q9UM11 496 aa10.04□□□□□ -0.8
PKP4-213ENST00000486254 A0A1B0GU03 582 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 NUDT19A8MXV4 375 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 C12orf77C9JDV5 145 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 MGST3O14880 152 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 HSPA12AO43301 675 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 FGF16O43320 207 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 JTBO76095 146 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 IGLV2-14P01704 120 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 PSG2P11465 335 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 PRDX2P32119 198 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 COL10A1Q03692 680 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 THOC7Q6I9Y2 204 aaKnown RBP10.03□□□□□ -0.8
PKP4-213ENST00000486254 LRP11Q86VZ4 500 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 MRPL37Q9BZE1 423 aaKnown RBP10.03□□□□□ -0.8
PKP4-213ENST00000486254 UFSP2Q9NUQ7 469 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 OR1A1Q9P1Q5 309 aa10.03□□□□□ -0.8
PKP4-213ENST00000486254 ARID1AO14497 2285 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 ITGB1BP1O14713 200 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 GPR137BO60478 399 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 FAM87AP0C7U9 286 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 GZMHP20718 246 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 CASP6P55212 293 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 KLRB1Q12918 225 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 GNMTQ14749 295 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 AANATQ16613 207 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 TMEM30BQ3MIR4 351 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 KRBOX4Q5JUW0 171 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 ZNF645Q8N7E2 425 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 UBAC2Q8NBM4 344 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 IL1F10Q8WWZ1 152 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 REG4Q9BYZ8 158 aa10.02□□□□□ -0.81
PKP4-213ENST00000486254 BARX1Q9HBU1 254 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms