RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 P01737 135 aa13.26□□□□□ -0.29
RXRA-203ENST00000484822 COL8A1P27658 744 aa13.26□□□□□ -0.29
RXRA-203ENST00000484822 BRS3P32247 399 aa13.26□□□□□ -0.29
RXRA-203ENST00000484822 MMP16P51512 607 aa13.26□□□□□ -0.29
RXRA-203ENST00000484822 ANKRD55Q3KP44 614 aa13.26□□□□□ -0.29
RXRA-203ENST00000484822 HDHD3Q9BSH5 251 aaPredicted RBP13.26□□□□□ -0.29
RXRA-203ENST00000484822 H0YL77 283 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 RECKO95980 971 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 R3HDM4Q96D70 268 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 ADAT3Q96EY9 351 aaPredicted RBP13.25□□□□□ -0.29
RXRA-203ENST00000484822 PARD6GQ9BYG4 376 aaPredicted RBP13.25□□□□□ -0.29
RXRA-203ENST00000484822 RAB1BQ9H0U4 201 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 CYB5R3P00387 301 aaPredicted RBP13.25□□□□□ -0.29
RXRA-203ENST00000484822 RNF224P0DH78 156 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 PSG6Q00889 435 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 ZIC1Q15915 447 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 ZNF260Q3ZCT1 412 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 ZNF600Q6ZNG1 722 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 PCGF1Q9BSM1 259 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 UFC1Q9Y3C8 167 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 TGIF2-C20orf24A0A0A6YYL0 155 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 LYZP61626 148 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 SRSF5Q13243 272 aaKnown RBP13.25□□□□□ -0.29
RXRA-203ENST00000484822 ATG4DQ86TL0 474 aaPredicted RBP13.25□□□□□ -0.29
RXRA-203ENST00000484822 OR1B1Q8NGR6 318 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 DDA1Q9BW61 102 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 MRPS18BQ9Y676 258 aaKnown RBP13.25□□□□□ -0.29
RXRA-203ENST00000484822 TRAV39A0A0B4J263 110 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 HOXD4P09016 255 aaPredicted RBP13.25□□□□□ -0.29
RXRA-203ENST00000484822 TMPRSS3P57727 454 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 NHLRC3Q5JS37 347 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 ZPLD1Q8TCW7 415 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 ASB10Q8WXI3 467 aa13.25□□□□□ -0.29
RXRA-203ENST00000484822 FLYWCH2Q96CP2 140 aaKnown RBP13.25□□□□□ -0.29
RXRA-203ENST00000484822 TDRD15B5MCY1 1934 aaKnown RBP13.25□□□□□ -0.29
RXRA-203ENST00000484822 FAM90A27PA6NNH2 459 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 GREM1O60565 184 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 DEDDO75618 318 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 GCGP01275 180 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 MEOX1P50221 254 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 SRSF9Q13242 221 aaKnown RBP eCLIP13.24□□□□□ -0.29
RXRA-203ENST00000484822 OR5A2Q8NGI9 324 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 DMRT1Q9Y5R6 373 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 LOC285556D6RIA3 1793 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 ZFC3H1O60293 1989 aaKnown RBP13.24□□□□□ -0.29
RXRA-203ENST00000484822 GAGE10A6NGK3 116 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 UQCRFS1P47985 274 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 FOXO1Q12778 655 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 WDR25Q64LD2 544 aaPredicted RBP13.24□□□□□ -0.29
RXRA-203ENST00000484822 TMEM108Q6UXF1 575 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 OR1P1Q8NH06 330 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 ZNF764Q96H86 408 aaPredicted RBP13.24□□□□□ -0.29
RXRA-203ENST00000484822 SMPD2O60906 423 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 WISP3O95389 354 aaPredicted RBP13.24□□□□□ -0.29
RXRA-203ENST00000484822 SOD3P08294 240 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 TMEM50BP56557 158 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 LRRC10Q5BKY1 277 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 PTP4A3O75365 173 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 PNLIPP16233 465 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 PAFAH1B2P68402 229 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 PIGYQ3MUY2 71 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 SPATA45Q537H7 98 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 WDFY1Q8IWB7 410 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 RND1Q92730 232 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 SLC26A1Q9H2B4 701 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 SMDT1Q9H4I9 107 aa13.24□□□□□ -0.29
RXRA-203ENST00000484822 TRPM6Q9BX84 2022 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 RHBDD2Q6NTF9 364 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 H1FOOQ8IZA3 346 aaPredicted RBP13.23□□□□□ -0.29
RXRA-203ENST00000484822 KCNK7Q9Y2U2 307 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 CDX1P47902 265 aaPredicted RBP13.23□□□□□ -0.29
RXRA-203ENST00000484822 H2BFSP57053 126 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 ZNF343Q6P1L6 599 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 MUC15Q8N387 334 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 STAG3L2P0CL84 134 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 PPP1CAP62136 330 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 OR4A4PQ8NGN8 299 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 MYOZ1Q9NP98 299 aaPredicted RBP13.23□□□□□ -0.29
RXRA-203ENST00000484822 GALNSP34059 522 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 MFAP2P55001 183 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 WFIKKN1Q96NZ8 548 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 RSG1Q9BU20 258 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 HSPB8Q9UJY1 196 aa13.23□□□□□ -0.29
RXRA-203ENST00000484822 A0A1W2PN81 502 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 OR2T8A6NH00 312 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 FGF11Q92914 225 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 GGACTQ9BVM4 153 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 ZNF665Q9H7R5 613 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 AP5S1Q9NUS5 200 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 KLHDC2Q9Y2U9 406 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 PLXNA1Q9UIW2 1896 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 ADAM11O75078 769 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 GAPDHP04406 335 aaKnown RBP13.22□□□□□ -0.29
RXRA-203ENST00000484822 NMUP48645 174 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 HOGA1Q86XE5 327 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 LRRC29Q8WV35 223 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 NPIPB8E9PQR5 432 aa13.22□□□□□ -0.29
RXRA-203ENST00000484822 C3orf80F5H4A9 247 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms