RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 LIN7CQ9NUP9 197 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-209ENST00000483002 CKLFQ9UBR5 152 aa13.04□□□□□ -0.32
RAB11FIP3-209ENST00000483002 TRAPPC2LQ9UL33 140 aa13.04□□□□□ -0.32
RAB11FIP3-209ENST00000483002 DIMT1Q9UNQ2 313 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP3-209ENST00000483002 TRAV8-7A0A075B6U6 113 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 TRBV5-5A0A0J9YX44 114 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 A0A1W2PPK0 400 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 IRGMA1A4Y4 181 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 MCRIP1C9JLW8 97 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 CCL24O00175 119 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 SLC31A2O15432 143 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 MOSP00540 346 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 RPLP1P05386 114 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 CD1BP29016 333 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 DMKNQ6E0U4 476 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 PRR18Q8N4B5 295 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 JAGN1Q8N5M9 183 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 C8orf31Q8N9H6 132 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 TMEM104Q8NE00 496 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 OR4K15Q8NH41 348 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 MUL1Q969V5 352 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 RAX2Q96IS3 184 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 RASL11BQ9BPW5 248 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 GON7Q9BXV9 100 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 DCLRE1BQ9H816 532 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 PLSCR3Q9NRY6 295 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 CHCHD3Q9NX63 227 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 GNG12Q9UBI6 72 aa13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 MRPS28Q9Y2Q9 187 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 EXOSC1Q9Y3B2 195 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP3-209ENST00000483002 C12orf77C9JDV5 145 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 SPINT2O43291 252 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 GPX5O75715 221 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 ZNF134P52741 427 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 RPS11P62280 158 aaKnown RBP eCLIP13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 GPR50Q13585 617 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 Q499Y3 187 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 CXorf66Q5JRM2 361 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 RAB12Q6IQ22 244 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 GLIPR1L1Q6UWM5 242 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 OR10V1Q8NGI7 309 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 TFAP2CQ92754 450 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 TMEM80Q96HE8 168 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 RDH12Q96NR8 316 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 S1PR3Q99500 378 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 SPACA1Q9HBV2 294 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 ETAA1Q9NY74 926 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 NBEAL2Q6ZNJ1 2754 aa13.02□□□□□ -0.33
RAB11FIP3-209ENST00000483002 COL7A1Q02388 2944 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 PNMA8CA0A1B0GUJ8 204 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 H0YHG0 523 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 HBZP02008 142 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 MAS1P04201 325 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 F2RL1P55085 397 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 DGCR2P98153 550 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 MED21Q13503 144 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 LRRC36Q1X8D7 754 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 DEFB136Q30KP8 78 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 Q3ZCU0 254 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 YIF1BQ5BJH7 314 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 CT45A1Q5HYN5 189 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 SLC25A48Q6ZT89 311 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 OR1L1Q8NH94 360 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 CT45A3Q8NHU0 189 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 CYGBQ8WWM9 190 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 OR14A2Q96R54 314 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 B9D2Q9BPU9 175 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 BANF2Q9H503 90 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 RAB9BQ9NP90 201 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 RCC2Q9P258 522 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 PEX16Q9Y5Y5 336 aa13.01□□□□□ -0.33
RAB11FIP3-209ENST00000483002 RRP9O43818 475 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 RCC1P18754 421 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 SOX6P35712 828 aa13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 CDX1P47902 265 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 FOXE3Q13461 319 aa13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 C6orf183Q5T699 404 aa13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 AWAT2Q6E213 333 aa13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 ZNF439Q8NDP4 499 aa13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 OR8H1Q8NGG4 311 aa13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 MRPS24Q96EL2 167 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 PGLYRP3Q96LB9 341 aa13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 HSPB9Q9BQS6 159 aa13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 SELENOIQ9C0D9 397 aa13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 ZMAT5Q9UDW3 170 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-209ENST00000483002 TRBV5-7A0A0A0MS05 114 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 UBE2QL1A1L167 161 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 TXNL1O43396 289 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 ELANEP08246 267 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 FSTP19883 344 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 VHLP40337 213 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 GP2P55259 537 aaKnown RBP12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 ST3GAL4Q11206 333 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 KIR2DS1Q14954 304 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 ZNF485Q8NCK3 441 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 OR8U1Q8NH10 309 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 GGHQ92820 318 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 TAF9BQ9HBM6 251 aa12.99□□□□□ -0.33
RAB11FIP3-209ENST00000483002 OR2S2Q9NQN1 319 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms