RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 GNG7O60262 68 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 DAOP14920 347 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 FSTP19883 344 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PRDX2P32119 198 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 TMEM183BQ1AE95 376 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PPP1R32Q7Z5V6 425 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 Q8WTZ3 238 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 CABLES2Q9BTV7 478 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 TMEM208Q9BTX3 173 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 PKIBQ9C010 78 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 YTHDF2Q9Y5A9 579 aaKnown RBP8.26□□□□□ -1.09
GARNL3-216ENST00000481242 SNCGO76070 127 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 FAM3AP98173 230 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 TGIF1Q15583 401 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 SLC25A47Q6Q0C1 308 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 C10orf111Q8N326 155 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 FAM216AQ8WUB2 273 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 ABHD1Q96SE0 405 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 BET1LQ9NYM9 111 aa8.26□□□□□ -1.09
GARNL3-216ENST00000481242 COL11A1P12107 1806 aaPredicted RBP8.25□□□□□ -1.09
GARNL3-216ENST00000481242 INTS1Q8N201 2190 aaKnown RBP8.25□□□□□ -1.09
GARNL3-216ENST00000481242 RTTNQ86VV8 2226 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 BCL3P20749 454 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 GLCCI1Q86VQ1 547 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 FBLIM1Q8WUP2 373 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 PRSS27Q9BQR3 290 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 C20orf24Q9BUV8 137 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 TMUB1Q9BVT8 246 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 MSL2Q9HCI7 577 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 IL17BQ9UHF5 180 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 V9GYH0 126 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 LINC00587B1AMM8 73 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 RAB29O14966 203 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 SYNGR1O43759 233 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 OR5AC1P0C628 307 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 CEBPEQ15744 281 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 FFAR4Q5NUL3 377 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 LEMD1Q68G75 181 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 OR1L1Q8NH94 360 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 RXFP4Q8TDU9 374 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 HARBI1Q96MB7 349 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 KCNK17Q96T54 332 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 PARP12Q9H0J9 701 aaKnown RBP8.25□□□□□ -1.09
GARNL3-216ENST00000481242 GAPDHP04406 335 aaKnown RBP8.25□□□□□ -1.09
GARNL3-216ENST00000481242 IGKV3-11P04433 115 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 PGA4P0DJD7 388 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 COMPP49747 757 aaPredicted RBP8.25□□□□□ -1.09
GARNL3-216ENST00000481242 ST3GAL2Q16842 350 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 OR1K1Q8NGR3 316 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 OR5C1Q8NGR4 320 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 TVP23CQ96ET8 276 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 MRPS18BQ9Y676 258 aaKnown RBP8.25□□□□□ -1.09
GARNL3-216ENST00000481242 NCOR1O75376 2440 aa8.25□□□□□ -1.09
GARNL3-216ENST00000481242 RNASEK-C17orf49H0YIS7 233 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 MBPP02686 304 aaPredicted RBP8.24□□□□□ -1.09
GARNL3-216ENST00000481242 SLC35B1P78383 322 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 NHLRC2Q8NBF2 726 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 ZNF714Q96N38 554 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 LINC00470Q9BZP3 86 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 OPN3Q9H1Y3 402 aaPredicted RBP8.24□□□□□ -1.09
GARNL3-216ENST00000481242 COA4Q9NYJ1 87 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 K7N7A8 449 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 EIF3GO75821 320 aaKnown RBP eCLIP8.24□□□□□ -1.09
GARNL3-216ENST00000481242 TTRP02766 147 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 RBM11P57052 281 aaKnown RBP8.24□□□□□ -1.09
GARNL3-216ENST00000481242 MRGPRGQ86SM5 289 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 SNX22Q96L94 193 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 LPAR2Q9HBW0 351 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 A0A1B0GU03 582 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 A0A1B0GV90 55 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 G3V3Q6 166 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 SYNGR3O43761 229 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 RPS4Y1P22090 263 aaKnown RBP8.24□□□□□ -1.09
GARNL3-216ENST00000481242 LIMS1P48059 325 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 CDC34P49427 236 aaPredicted RBP8.24□□□□□ -1.09
GARNL3-216ENST00000481242 FGF12P61328 243 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 OR52B4Q8NGK2 314 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 PIMREGQ9BSJ6 248 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 ZNF586Q9NXT0 402 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 TECRQ9NZ01 308 aaKnown RBP8.24□□□□□ -1.09
GARNL3-216ENST00000481242 FAM157AC9JC47 383 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 DCTN6O00399 190 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 SOCS1O15524 211 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 MPC2O95563 127 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 VSIG8P0DPA2 414 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 P2RY1P47900 373 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 MVDP53602 400 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 SUMO1P63165 101 aaKnown RBP8.24□□□□□ -1.09
GARNL3-216ENST00000481242 RSPO4Q2I0M5 234 aaPredicted RBP8.24□□□□□ -1.09
GARNL3-216ENST00000481242 TBC1D26Q86UD7 250 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 OR8G5Q8NG78 346 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 PRDM14Q9GZV8 571 aa8.24□□□□□ -1.09
GARNL3-216ENST00000481242 B9A039 149 aa8.23□□□□□ -1.09
GARNL3-216ENST00000481242 DLL1O00548 723 aa8.23□□□□□ -1.09
GARNL3-216ENST00000481242 ATXN7O15265 892 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-216ENST00000481242 GCGP01275 180 aa8.23□□□□□ -1.09
GARNL3-216ENST00000481242 SLC25A5P05141 298 aaKnown RBP8.23□□□□□ -1.09
GARNL3-216ENST00000481242 CELA2AP08217 269 aa8.23□□□□□ -1.09
GARNL3-216ENST00000481242 HLA-GP17693 338 aa8.23□□□□□ -1.09
GARNL3-216ENST00000481242 CCL8P80075 99 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms