RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 EVPLLA8MZ36 301 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 COPEO14579 308 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 OR5F1O95221 314 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 TNNC2P02585 160 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 IL3P08700 152 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 KRTAP1-4P0C5Y4 121 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 NTF3P20783 257 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 CCR7P32248 378 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 CAPZBP47756 277 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 RANP62826 216 aaKnown RBP3.37□□□□□ -1.87
COPA-203ENST00000481040 TSPAN31Q12999 210 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 SRSF6Q13247 344 aaKnown RBP3.37□□□□□ -1.87
COPA-203ENST00000481040 IHHQ14623 411 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 LRRC75BQ2VPJ9 315 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 TRMT12Q53H54 448 aaKnown RBP3.37□□□□□ -1.87
COPA-203ENST00000481040 AKIRIN2Q53H80 203 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 MRPL2Q5T653 305 aaKnown RBP3.37□□□□□ -1.87
COPA-203ENST00000481040 FAM104BQ5XKR9 115 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 FAM173BQ6P4H8 233 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 Q6ZRU5 148 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 NT5DC3Q86UY8 548 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 DOLPP1Q86YN1 238 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 NATD1Q8N6N6 113 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 UBALD1Q8TB05 177 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 ITLN2Q8WWU7 325 aaPredicted RBP3.37□□□□□ -1.87
COPA-203ENST00000481040 ASB17Q8WXJ9 295 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 REEP6Q96HR9 211 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 C9orf16Q9BUW7 83 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 OR51I1Q9H343 314 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 HDGFL3Q9Y3E1 203 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 RFNGQ9Y644 331 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 SMAD5-AS1Q9Y6J3 95 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 KIAA1671Q9BY89 1806 aa3.37□□□□□ -1.87
COPA-203ENST00000481040 CABIN1Q9Y6J0 2220 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 ARAP3Q8WWN8 1544 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 POP7O75817 140 aaKnown RBP3.36□□□□□ -1.87
COPA-203ENST00000481040 CRYBA1P05813 215 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 OR4A8P0C604 315 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 CISD3P0C7P0 127 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 ZNF708P17019 499 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 S100A2P29034 98 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 NOVP48745 357 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 OR2F1Q13607 317 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 RSU1Q15404 277 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 OR10K2Q6IF99 312 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 IGFL2Q6UWQ7 119 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 TCF23Q7RTU1 214 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 SLC51BQ86UW2 128 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 SAXO1Q8IYX7 474 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 OR5B17Q8NGF7 314 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 MFSD8Q8NHS3 518 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 PHOSPHO2Q8TCD6 241 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 PEBP4Q96S96 227 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.36□□□□□ -1.87
COPA-203ENST00000481040 LINC00527Q9UJ94 153 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 SLC22A7Q9Y694 548 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 SCN1AP35498 2009 aa3.36□□□□□ -1.87
COPA-203ENST00000481040 KMT2EQ8IZD2 1858 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 TGIF2-C20orf24A0A0A6YYL0 155 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 IZUMO1RA6ND01 250 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 ARGFXA6NJG6 315 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 KPNA3O00505 521 aaPredicted RBP3.35□□□□□ -1.87
COPA-203ENST00000481040 KRT75O95678 551 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 REG1AP05451 166 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 OR5AC1P0C628 307 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 SULT1A1P50225 295 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 NAA20P61599 178 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 EBPQ15125 230 aaKnown RBP3.35□□□□□ -1.87
COPA-203ENST00000481040 HIST3H3Q16695 136 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 N4BP2L1Q5TBK1 243 aaPredicted RBP3.35□□□□□ -1.87
COPA-203ENST00000481040 LAIR2Q6ISS4 152 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 LCN8Q6JVE9 175 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 PRSS54Q6PEW0 395 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 ZBTB8OSQ8IWT0 167 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 MIR7-3HGQ8N6C7 128 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 SPANXA2-OT1Q8N9U9 137 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 TMEM75Q8N9X5 138 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 OR8S1Q8NH09 359 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 OR51H1Q8NH63 302 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 APOBEC3DQ96AK3 386 aaPredicted RBP3.35□□□□□ -1.87
COPA-203ENST00000481040 GALMQ96C23 342 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 DGCR14Q96DF8 476 aaKnown RBP3.35□□□□□ -1.87
COPA-203ENST00000481040 IMP4Q96G21 291 aaKnown RBP3.35□□□□□ -1.87
COPA-203ENST00000481040 OR7D2Q96RA2 312 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 FAM60AQ9NP50 221 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 LSM5Q9Y4Y9 91 aaKnown RBP3.35□□□□□ -1.87
COPA-203ENST00000481040 PCM1Q15154 2024 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 MYO5BQ9ULV0 1848 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 ADGRL3Q9HAR2 1447 aa3.35□□□□□ -1.87
COPA-203ENST00000481040 F5H5P2 479 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 IGHV1-46P01743 117 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 REG1BP48304 166 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 PSMB3P49720 205 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 GABARAPL2P60520 117 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 GLO1Q04760 184 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 TMEM267Q0VDI3 215 aaPredicted RBP3.34□□□□□ -1.87
COPA-203ENST00000481040 TMED2Q15363 201 aa3.34□□□□□ -1.87
COPA-203ENST00000481040 ABCA11PQ4W5N1 156 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms