RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 A0A1W2PNR3 127 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 NUPR1O60356 82 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 WISP1O95388 367 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 HLA-DOBP13765 273 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 GUCA1AP43080 201 aaPredicted RBP7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 MMDQ15546 238 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 TMEM95Q3KNT9 176 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 ZNF787Q6DD87 383 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 FAM57BQ71RH2 274 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 C1QL2Q7Z5L3 287 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 PIP4P1Q86T03 277 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 PTPMT1Q8WUK0 201 aaPredicted RBP7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 CACNA1DQ01668 2161 aa7.32□□□□□ -1.24
SNRNP200-203ENST00000480242 BCL2P10415 239 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 CNN1P51911 297 aaKnown RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 HIST1H3AP68431 136 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 ZNF154Q13106 437 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 LINC00696Q6ZRV3 163 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 VN1R17PQ8TDU5 208 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 C1orf147Q96MC9 270 aaPredicted RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 PECRQ9BY49 303 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 CTDSP1Q9GZU7 261 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 LIME1Q9H400 295 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 GLRX2Q9NS18 164 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 MCTS1Q9ULC4 181 aaKnown RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 NKX2-6A6NCS4 301 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 H3BP45 60 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 ITGB1BP1O14713 200 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 UMODP07911 640 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 NKX2-1P43699 371 aaPredicted RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 NUP54Q7Z3B4 507 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 TMEM252Q8N6L7 170 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 OR8G5Q8NG78 346 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 SAP25Q8TEE9 199 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 CIB3Q96Q77 187 aaPredicted RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 MSL2Q9HCI7 577 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 PLEKHJ1Q9NW61 149 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 PRSS50Q9UI38 385 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 RNF150Q9ULK6 438 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 RNF24Q9Y225 148 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 ATRXP46100 2492 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 A0A1W2PNV4 684 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 ETV2O00321 342 aaPredicted RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 NXPH2O95156 264 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 ACP1P24666 158 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 MPLP40238 635 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 FAM3BP58499 235 aaPredicted RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 BSXQ3C1V8 233 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 C9orf135Q5VTT2 229 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 DPPA3Q6W0C5 159 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 LIAT1Q6ZQX7 453 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 OR5AS1Q8N127 324 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 OR51G1Q8NGK1 321 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 LIPHQ8WWY8 451 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 ZCCHC14Q8WYQ9 949 aaKnown RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 GNPNAT1Q96EK6 184 aaPredicted RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 ALKBH3Q96Q83 286 aaPredicted RBP7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 VAMP8Q9BV40 100 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 ZNF160Q9HCG1 818 aa7.31□□□□□ -1.24
SNRNP200-203ENST00000480242 CADP27708 2225 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 IGKV3D-11A0A0A0MRZ8 115 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 TRAV34A0A0B4J273 112 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 ANKUB1A6NFN9 424 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 H0YIG0 161 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 RRP8O43159 456 aaKnown RBP7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 PITX3O75364 302 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 PDLIM4P50479 330 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 TESK1Q15569 626 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 ACOT6Q3I5F7 207 aaPredicted RBP7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 CXorf66Q5JRM2 361 aaPredicted RBP7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 MYPOPQ86VE0 399 aaPredicted RBP7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 NAT6Q93015 286 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 SLAMF6Q96DU3 332 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 SLC35E1Q96K37 410 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 VPS25Q9BRG1 176 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 NUDT16L1Q9BRJ7 211 aaKnown RBP7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 TXNIPQ9H3M7 391 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 PLEKHF2Q9H8W4 249 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 PATZ1Q9HBE1 687 aaKnown RBP7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 PRR14LQ5THK1 2151 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 FER1L5A0AVI2 2057 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 IGKV1D-43A0A0B4J1Z2 117 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 IGHV5-10-1A0A0J9YXX1 117 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 IGHEP01854 428 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 PGCP20142 388 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 FAM189A2Q15884 450 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 OR2T10Q8NGZ9 312 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 SLC46A1Q96NT5 459 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 RSG1Q9BU20 258 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 SLC2A9Q9NRM0 540 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 FAM206AQ9NX38 181 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 MED29Q9NX70 200 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 GRIFINA4D1Z8 144 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 LRRC3CA6NJW4 275 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 HMGB3O15347 200 aaKnown RBP7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 TNFSF13O75888 250 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 IGHV3-9P01782 118 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 PLA2G5P39877 138 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 CLDN17P56750 224 aa7.3□□□□□ -1.24
SNRNP200-203ENST00000480242 POU3F1Q03052 451 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms