RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 J3QR06 171 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 GADD45AP24522 165 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 SSTR5P35346 364 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 ARHGDIBP52566 201 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 TMEM50BP56557 158 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 OR10A3P58181 314 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 HTD2P86397 168 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 ARL6IP1Q15041 203 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 SSX2Q16385 188 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 CCDC144NLQ6NUI1 221 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 MOB1BQ7L9L4 216 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 OR4F5Q8NH21 305 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 MRPL30Q8TCC3 161 aaKnown RBP12.5□□□□□ -0.41
C9orf3-217ENST00000479161 YIPF6Q96EC8 236 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 SULT4A1Q9BR01 284 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 NICN1Q9BSH3 213 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 LIN7BQ9HAP6 207 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 PSG11Q9UQ72 335 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 UBE2QL1A1L167 161 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 METTL21EPA6NDL7 271 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 A6NHS1 94 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 C12orf77C9JDV5 145 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 H3BUX3 64 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 SOCS1O15524 211 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 TSPAN9O75954 239 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 SCGNO76038 276 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 CLDN12P56749 244 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 AWAT1Q58HT5 328 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 HES5Q5TA89 166 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 Q6ZTK2 550 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 C6orf201Q7Z4U5 140 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 CROCCP3Q8IVE0 287 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 DYNAPQ8N1N2 210 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 NDNFQ8TB73 568 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 CHCHD6Q9BRQ6 235 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 FAAP24Q9BTP7 215 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 C16orf95Q9H693 158 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 GFOD1Q9NXC2 390 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 C1RLQ9NZP8 487 aa12.49□□□□□ -0.41
C9orf3-217ENST00000479161 RCC1P18754 421 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-217ENST00000479161 NFYBP25208 207 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 BRS3P32247 399 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 SDC2P34741 201 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 ZNF137PP52743 207 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 MADCAM1Q13477 382 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 NKAPLQ5M9Q1 402 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 SFXN4Q6P4A7 337 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 BAIAP2L2Q6UXY1 529 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 C12orf54Q6X4T0 127 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 RFESDQ8TAC1 157 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 CCDC107Q8WV48 283 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 OCSTAMPQ9BR26 566 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 KCNK15Q9H427 330 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 RANBP3Q9H6Z4 567 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-217ENST00000479161 TAF9BQ9HBM6 251 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.48□□□□□ -0.41
C9orf3-217ENST00000479161 ABCB10Q9NRK6 738 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 TCF19Q9Y242 345 aa12.48□□□□□ -0.41
C9orf3-217ENST00000479161 RAB27BO00194 218 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 SDCBPO00560 298 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-217ENST00000479161 HBZP02008 142 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 VEGFCP49767 419 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 RAB7AP51149 207 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 HMGN3Q15651 99 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 SRSF7Q16629 238 aaKnown RBP eCLIP12.47□□□□□ -0.414e-7■■■■□ 23.7
C9orf3-217ENST00000479161 TPTE2P1Q5T6R2 138 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 C16orf82Q7Z2V1 217 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 THNSL2Q86YJ6 484 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 OR8H3Q8N146 312 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 CENPOQ9BU64 300 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 BEX1Q9HBH7 125 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 SCOCQ9UIL1 159 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 JPT1Q9UK76 154 aa12.47□□□□□ -0.41
C9orf3-217ENST00000479161 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 LOC100506127A0A0U1RQW1 187 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 A6NDX4 124 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 FAM90A9PA6NNJ1 464 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 SERPINE3A8MV23 424 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 AIREO43918 545 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 YPEL1O60688 119 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 DIRAS3O95661 229 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 MNDAP41218 407 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 RAG2P55895 527 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 RELBQ01201 579 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 HABP2Q14520 560 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-217ENST00000479161 PLAC9Q5JTB6 97 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 DHRS7BQ6IAN0 325 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-217ENST00000479161 C11orf88Q6PI97 169 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 SLC25A48Q6ZT89 311 aaKnown RBP12.46□□□□□ -0.41
C9orf3-217ENST00000479161 ZNF439Q8NDP4 499 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 OR13F1Q8NGS4 319 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 GALMQ96C23 342 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 RAB3CQ96E17 227 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 ARHGAP5-AS1Q96IT6 56 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 YPEL2Q96QA6 119 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 ZNF747Q9BV97 191 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 PECRQ9BY49 303 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms