RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ESDP10768 282 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 PSMB3P49720 205 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 ZNF295-AS1Q8N0V1 137 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 OR14C36Q8NHC7 312 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 BCL2L2Q92843 193 aaPredicted RBP18.25■□□□□ 0.51
SDF4-206ENST00000478938 EMC6Q9BV81 110 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.25■□□□□ 0.51
SDF4-206ENST00000478938 SLC39A9Q9NUM3 307 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 ELOVL5Q9NYP7 299 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 VDAC3Q9Y277 283 aa18.25■□□□□ 0.51
SDF4-206ENST00000478938 TMED7-TICAM2A0A0A6YYA0 188 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 CTSEP14091 401 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 CD46P15529 392 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 PGCP20142 388 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 BIDP55957 195 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 RIPPLY3P57055 190 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 ZNF468Q5VIY5 522 aaPredicted RBP18.24■□□□□ 0.51
SDF4-206ENST00000478938 TBC1D26Q86UD7 250 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 CLUHP3Q96NS8 147 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 KCNK17Q96T54 332 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 CLN8Q9UBY8 286 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 IGKV1D-33P01593 117 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 IGKV1-33P01594 117 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 DEFB110Q30KQ9 67 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 SIGLECL1Q8N7X8 197 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 SGMS2Q8NHU3 365 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 Q96M66 194 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 OR6C1Q96RD1 312 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 WNT10AQ9GZT5 417 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 C5orf42Q9H799 3197 aa18.24■□□□□ 0.51
SDF4-206ENST00000478938 TNFSF14O43557 240 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 ZNF133P52736 654 aaPredicted RBP18.23■□□□□ 0.51
SDF4-206ENST00000478938 ARL16Q0P5N6 197 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 PRTGQ2VWP7 1150 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 ATOH7Q8N100 152 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 ELSPBP1Q96BH3 223 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 DDIT4LQ96D03 193 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 ZNF586Q9NXT0 402 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 LHFPL6Q9Y693 200 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 EGR1P18146 543 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 SRPXP78539 464 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 POU3F1Q03052 451 aaPredicted RBP18.23■□□□□ 0.51
SDF4-206ENST00000478938 NMSQ5H8A3 153 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 SPIN3Q5JUX0 258 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 OR2M3Q8NG83 312 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 NXF5Q9H1B4 397 aaKnown RBP18.23■□□□□ 0.51
SDF4-206ENST00000478938 SLC25A22Q9H936 323 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 TAAR3PQ9P1P4 343 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 IL19Q9UHD0 177 aa18.23■□□□□ 0.51
SDF4-206ENST00000478938 RANBP2P49792 3224 aaKnown RBP18.22■□□□□ 0.51
SDF4-206ENST00000478938 WDR1O75083 606 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 C1QTNF9P0C862 333 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 DTYMKP23919 212 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 VIPR2P41587 438 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 RPP25LQ8N5L8 163 aaKnown RBP18.22■□□□□ 0.51
SDF4-206ENST00000478938 ABHD14BQ96IU4 210 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 TMEM56Q96MV1 263 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 TMEM56-RWDD3S4R434 201 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 ANGPTL7O43827 346 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 NPIPB7O75200 414 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 GP1BBP13224 206 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 HOXC12P31275 282 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 TLE3Q04726 772 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 ZNF77Q15935 545 aa18.22■□□□□ 0.51
SDF4-206ENST00000478938 A6NCN8 305 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 MS4A18H0YCH9 400 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 FAHP16930 419 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 OR1D4P47884 311 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 MS4A18Q3C1V0 323 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 DOK3Q7L591 496 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 DTX1Q86Y01 620 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 MOB1AQ9H8S9 216 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 SLC35D1Q9NTN3 355 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 TBL2Q9Y4P3 447 aaKnown RBP18.21■□□□□ 0.51
SDF4-206ENST00000478938 A0A1W2PRS3 328 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 PGPEP1LA6NFU8 196 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 IL33O95760 270 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 CLPSP04118 112 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 NPPCP23582 126 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 GNRHRP30968 328 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 CDAP32320 146 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 YPEL3P61236 119 aaPredicted RBP18.21■□□□□ 0.51
SDF4-206ENST00000478938 KIR2DS3Q14952 304 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 CNKSR3Q6P9H4 555 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.21■□□□□ 0.51
SDF4-206ENST00000478938 ZNF596Q8TC21 504 aa18.21■□□□□ 0.51
SDF4-206ENST00000478938 PSMG3Q9BT73 122 aaPredicted RBP18.21■□□□□ 0.51
SDF4-206ENST00000478938 TIAF1O95411 115 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 PPYP01298 95 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 ZNF525Q8N782 197 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 MRGPRX1Q96LB2 322 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 ZNF430Q9H8G1 570 aaPredicted RBP18.2■□□□□ 0.5
SDF4-206ENST00000478938 OR5B21A6NL26 309 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 RER1O15258 196 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 MLNRO43193 412 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 VENTXO95231 258 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 DRD3P35462 400 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 DUSP3P51452 185 aaPredicted RBP18.2■□□□□ 0.5
SDF4-206ENST00000478938 FUT7Q11130 342 aa18.2■□□□□ 0.5
SDF4-206ENST00000478938 IZUMO4Q1ZYL8 232 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms