RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 POLEQ07864 2286 aa5.62□□□□□ -1.51
LDB3-206ENST00000477489 A0A1B0GW55 424 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 C5orf51A6NDU8 294 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 LRRC30A6NM36 301 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 RNF212BA8MTL3 300 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 H0Y980 276 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 H0YL77 283 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 SMLR1H3BR10 107 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 MPPED1O15442 326 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 ATP6V1G1O75348 118 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 MPC2O95563 127 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 FSTL3O95633 263 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 LHBP01229 141 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 GRPP07492 148 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 DUX4L2P0CJ85 424 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 DUX4L3P0CJ86 424 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 DUX4L4P0CJ87 422 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 DUX4L5P0CJ88 424 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 DUX4L6P0CJ89 424 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 DUX4L7P0CJ90 424 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 SLC25A6P12236 298 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 GZMHP20718 246 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 AADACP22760 399 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 SERPINF1P36955 418 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 NUP62P37198 522 aaPredicted RBP5.61□□□□□ -1.51
LDB3-206ENST00000477489 EIF5AP63241 154 aaKnown RBP5.61□□□□□ -1.51
LDB3-206ENST00000477489 HTD2P86397 168 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 IL15RAQ13261 267 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 LY6DQ14210 128 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 TMEM187Q14656 261 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 OPCMLQ14982 345 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 EFNB3Q15768 340 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 C2orf68Q2NKX9 166 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 CR1LQ2VPA4 569 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 Q5BKY6 102 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 PRSS54Q6PEW0 395 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 ZNF546Q86UE3 836 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 KCNRGQ8N5I3 272 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 ZNF680Q8NEM1 530 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 OR2Z1Q8NG97 314 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 OR5D13Q8NGL4 314 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 FAM222BQ8WU58 562 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 LRRC29Q8WV35 223 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 PPP1R1CQ8WVI7 109 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 MAFIPQ8WZ33 124 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 RDH5Q92781 318 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 RNASE6Q93091 150 aaKnown RBP5.61□□□□□ -1.51
LDB3-206ENST00000477489 SNX22Q96L94 193 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 TMEM56Q96MV1 263 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 MFFQ9GZY8 342 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 METTL8Q9H825 291 aaKnown RBP5.61□□□□□ -1.51
LDB3-206ENST00000477489 HEXA-AS1Q9H8Q6 139 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 PLSCR3Q9NRY6 295 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 DUX4Q9UBX2 424 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 NDRG3Q9UGV2 375 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 UBQLN2Q9UHD9 624 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 DUSP13Q9UII6 198 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 TRAPPC2LQ9UL33 140 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 TMEM56-RWDD3S4R434 201 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 COL12A1Q99715 3063 aa5.61□□□□□ -1.51
LDB3-206ENST00000477489 FXYD6-FXYD2A0A087WZ82 144 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 TRAV14DV4A0A0A6YYC5 116 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 C3orf85A0A1B0GTC6 90 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 KANTRA0A1W2PQU2 76 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 hCG_1807616A0A1W2PRN6 198 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 CLEC18AA5D8T8 446 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 ZSCAN5BA6NJL1 495 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 ATP6V1G2-DDX39BF2Z307 99 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 SIRPB1O00241 398 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 ITGB1BP1O14713 200 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 HS3ST1O14792 307 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 TAAR5O14804 337 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 MGST3O14880 152 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 ARPC5O15511 151 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 ATG12O94817 140 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 SIX6O95475 246 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 RLN2P04090 185 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 HEXAP06865 529 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 SCTP09683 121 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 IRF2P14316 349 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 MUC1P15941 1255 aaPredicted RBP5.6□□□□□ -1.51
LDB3-206ENST00000477489 UCP1P25874 307 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 DUSP1P28562 367 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 LUMP51884 338 aaPredicted RBP5.6□□□□□ -1.51
LDB3-206ENST00000477489 RAB14P61106 215 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 UBA52P62987 128 aaKnown RBP5.6□□□□□ -1.51
LDB3-206ENST00000477489 BAMBIQ13145 260 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 SMCO1Q147U7 214 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 HERPUD1Q15011 391 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 SLC9A3R2Q15599 337 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 IGFBP7Q16270 282 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 ANKRD55Q3KP44 614 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 IGSF11Q5DX21 431 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 CLLU1Q5K131 121 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 NCMAPQ5T1S8 102 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 PRAMEF6Q5VXH4 476 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 Q6ZPA2 131 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 TMUB2Q71RG4 321 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 C1orf87Q8N0U7 546 aa5.6□□□□□ -1.51
LDB3-206ENST00000477489 ZNF561Q8N587 486 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms