RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CIB2O75838 187 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 MT-ND4P03905 459 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 IGF1P05019 195 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 ELANEP08246 267 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 NHLRC4P0CG21 123 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-228ENST00000476267 IGHV3-43DP0DP04 118 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 PSMB8P28062 276 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 ZNF93P35789 620 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-228ENST00000476267 ZNF134P52741 427 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 DDI2Q5TDH0 399 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 RPL22L1Q6P5R6 122 aaKnown RBP10.25□□□□□ -0.77
MRPL55-228ENST00000476267 SLC25A48Q6ZT89 311 aaKnown RBP10.25□□□□□ -0.77
MRPL55-228ENST00000476267 ORAI1Q96D31 301 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 Q96MT0 163 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 SLC29A1Q99808 456 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 GON7Q9BXV9 100 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 TMEM138Q9NPI0 162 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 LOC100130705A0A1B0GUX0 176 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 MAGEA13PA6NCF6 341 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 C12orf77C9JDV5 145 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 OGG1O15527 345 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 GPX5O75715 221 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 MOSP00540 346 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 LALBAP00709 142 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 CD2P06729 351 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 SERPINA2P20848 420 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 ETV1P50549 477 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 F2RL1P55085 397 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 KIAA0141Q14154 515 aaPredicted RBP10.24□□□□□ -0.77
MRPL55-228ENST00000476267 SMN1Q16637 294 aaKnown RBP10.24□□□□□ -0.77
MRPL55-228ENST00000476267 CXorf66Q5JRM2 361 aaPredicted RBP10.24□□□□□ -0.77
MRPL55-228ENST00000476267 C9orf66Q5T8R8 295 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 ZFP1Q6P2D0 407 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 OR8H1Q8NGG4 311 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 OR5M8Q8NGP6 311 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 CCDC107Q8WV48 283 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 C4orf3Q8WVX3 66 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 PRR25Q96S07 402 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 ING4Q9UNL4 249 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 RPL36Q9Y3U8 105 aaKnown RBP10.24□□□□□ -0.77
MRPL55-228ENST00000476267 U3KQK5 164 aa10.24□□□□□ -0.77
MRPL55-228ENST00000476267 TRBV5-5A0A0J9YX44 114 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 AIPO00170 330 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 TXNL1O43396 289 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 ZNF780AO75290 641 aaPredicted RBP10.23□□□□□ -0.77
MRPL55-228ENST00000476267 SC5DO75845 299 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 CSTBP04080 98 aaKnown RBP10.23□□□□□ -0.77
MRPL55-228ENST00000476267 BDKRB2P30411 391 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 RPS11P62280 158 aaKnown RBP eCLIP10.23□□□□□ -0.77
MRPL55-228ENST00000476267 CT45A1Q5HYN5 189 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 OR2G6Q5TZ20 316 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 ASPHD1Q5U4P2 390 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 LYPD6Q86Y78 171 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 OR13C5Q8NGS8 318 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 CT45A3Q8NHU0 189 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 SMIM19Q96E16 107 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 CYYR1Q96J86 154 aa10.23□□□□□ -0.77
MRPL55-228ENST00000476267 ZNF184Q99676 751 aaPredicted RBP10.23□□□□□ -0.77
MRPL55-228ENST00000476267 TRAV8-7A0A075B6U6 113 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 RRP9O43818 475 aaKnown RBP10.22□□□□□ -0.77
MRPL55-228ENST00000476267 GTF2F2P13984 249 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 FSTP19883 344 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 IL3RAP26951 378 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 PPIFP30405 207 aaKnown RBP10.22□□□□□ -0.77
MRPL55-228ENST00000476267 RAB25P57735 213 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 PPP3R1P63098 170 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 RIPK1Q13546 671 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 TMEM30BQ3MIR4 351 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 ATAD3CQ5T2N8 411 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 DMKNQ6E0U4 476 aaPredicted RBP10.22□□□□□ -0.77
MRPL55-228ENST00000476267 ZNF485Q8NCK3 441 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 PGLYRP3Q96LB9 341 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 RASL11BQ9BPW5 248 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 C9orf16Q9BUW7 83 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 PAK1IP1Q9NWT1 392 aaPredicted RBP10.22□□□□□ -0.77
MRPL55-228ENST00000476267 LYSTQ99698 3801 aa10.22□□□□□ -0.77
MRPL55-228ENST00000476267 SEC14L6B5MCN3 397 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 I3L521 148 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 IGLV1-40P01703 118 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 VDAC1P21796 283 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 SOX6P35712 828 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 RUNX1Q01196 453 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 LSAMPQ13449 338 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 SLC22A6Q4U2R8 563 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 SYT6Q5T7P8 510 aaPredicted RBP10.21□□□□□ -0.77
MRPL55-228ENST00000476267 ODF3L1Q8IXM7 274 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 KCTD7Q96MP8 289 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 RDH12Q96NR8 316 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 SPACA1Q9HBV2 294 aa10.21□□□□□ -0.77
MRPL55-228ENST00000476267 MBNL3Q9NUK0 354 aaKnown RBP10.21□□□□□ -0.77
MRPL55-228ENST00000476267 TRBV5-7A0A0A0MS05 114 aa10.2□□□□□ -0.78
MRPL55-228ENST00000476267 LANCL1O43813 399 aa10.2□□□□□ -0.78
MRPL55-228ENST00000476267 HBZP02008 142 aa10.2□□□□□ -0.78
MRPL55-228ENST00000476267 RCC1P18754 421 aaPredicted RBP10.2□□□□□ -0.78
MRPL55-228ENST00000476267 DCKP27707 260 aa10.2□□□□□ -0.78
MRPL55-228ENST00000476267 ECI1P42126 302 aa10.2□□□□□ -0.78
MRPL55-228ENST00000476267 ADARB1P78563 741 aaKnown RBP10.2□□□□□ -0.78
MRPL55-228ENST00000476267 C6orf183Q5T699 404 aa10.2□□□□□ -0.78
MRPL55-228ENST00000476267 STEAP3Q658P3 488 aa10.2□□□□□ -0.78
MRPL55-228ENST00000476267 SIGIRRQ6IA17 410 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms