RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	BLCAP	P62952	87 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	P2RY14	Q15391	338 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	CD200R1L	Q6Q8B3	271 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	SPART	Q8N0X7	666 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	KCNG3	Q8TAE7	436 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	MRPL30	Q8TCC3	161 aa	Known RBP	13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	SULT4A1	Q9BR01	284 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580		Q9H521	79 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	SERTAD4	Q9NUC0	356 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	NDUFB11	Q9NX14	153 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	TRAPPC2L	Q9UL33	140 aa		13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	RRP15	Q9Y3B9	282 aa	Known RBP	13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.25	□□□□□ -0.29
VPS8-222	ENST00000475580	IGHV3-43	A0A0B4J1X8	118 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	FAM90A9P	A6NNJ1	464 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	SDCBP	O00560	298 aa	Predicted RBP	13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	HBZ	P02008	142 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	IGHV3-43D	P0DP04	118 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	NKAPL	Q5M9Q1	402 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	C6orf183	Q5T699	404 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	UBE2U	Q5VVX9	321 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	CCDC144NL	Q6NUI1	221 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	C11orf88	Q6PI97	169 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	C5orf24	Q7Z6I8	188 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	LINC00311	Q8N616	119 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	KLHDC1	Q8N7A1	406 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	C8orf31	Q8N9H6	132 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	OR1L1	Q8NH94	360 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	CFHR4	Q92496	578 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	TOMM40L	Q969M1	308 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	RPE	Q96AT9	228 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	LPAR5	Q9H1C0	372 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	MBNL3	Q9NUK0	354 aa	Known RBP	13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	WNK1	Q9H4A3	2382 aa		13.24	□□□□□ -0.29
VPS8-222	ENST00000475580	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.23	□□□□□ -0.29
VPS8-222	ENST00000475580		H3BUI4	141 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	TIMM23	O14925	209 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	CLDN12	P56749	244 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	MADCAM1	Q13477	382 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	HERPUD1	Q15011	391 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	HIST2H2BD	Q6DRA6	164 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	TREML4	Q6UXN2	200 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580		Q6ZPA2	131 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	C16orf82	Q7Z2V1	217 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	OR2W3	Q7Z3T1	314 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	C6orf201	Q7Z4U5	140 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	SVOP	Q8N4V2	548 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	ZNF439	Q8NDP4	499 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	WIPF2	Q8TF74	440 aa	Predicted RBP	13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	NEDD4L	Q96PU5	975 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	FAAP24	Q9BTP7	215 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	PRSS22	Q9GZN4	317 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	LIN7B	Q9HAP6	207 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	PLGRKT	Q9HBL7	147 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	LRRC42	Q9Y546	428 aa		13.23	□□□□□ -0.29
VPS8-222	ENST00000475580	TRDV1	A0A1B0GX56	115 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	SLC31A2	O15432	143 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	OR2F2	O95006	317 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	AMY1A	P04745	511 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	AMY2A	P04746	511 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	ARSB	P15848	533 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	MNDA	P41218	407 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	ARHGDIB	P52566	201 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	RAB11B	Q15907	218 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	TMEM95	Q3KNT9	176 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580		Q3ZCU0	254 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	FAM89B	Q8N5H3	189 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	DRAM1	Q8N682	238 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	DTX3	Q8N9I9	347 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	OR51D1	Q8NGF3	324 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	OR10X1	Q8NGY0	326 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	OR56B4	Q8NH76	319 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	ST6GALNAC6	Q969X2	333 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	RBM14	Q96PK6	669 aa	Known RBP	13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	OCSTAMP	Q9BR26	566 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	SLC25A33	Q9BSK2	321 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	WNT10A	Q9GZT5	417 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	TAF9B	Q9HBM6	251 aa		13.22	□□□□□ -0.29
VPS8-222	ENST00000475580	TRAV1-2	A0A0B4J238	106 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580		M0QZ24	198 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	HSD17B6	O14756	317 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	LDLRAD4	O15165	306 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	SOCS1	O15524	211 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	SPINT2	O43291	252 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	SNRNP70	P08621	437 aa	Known RBP	13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	VSIG10L2	P0DP72	767 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	RAB7A	P51149	207 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	ZNF134	P52741	427 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	OR10A3	P58181	314 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	PLA2G7	Q13093	441 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	TRAT1	Q6PIZ9	186 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	THNSL2	Q86YJ6	484 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	OR8H3	Q8N146	312 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	PRR18	Q8N4B5	295 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	CAPSL	Q8WWF8	208 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	FAM3D	Q96BQ1	224 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580		V9GY05	133 aa		13.21	□□□□□ -0.29
VPS8-222	ENST00000475580	TET2	Q6N021	2002 aa	Predicted RBP	13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms