RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MS4A3Q96HJ5 214 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 P2RX4Q99571 388 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 MS4A5Q9H3V2 200 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 PIPOXQ9P0Z9 390 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 TET1Q8NFU7 2136 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 UPK3AO75631 287 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 CRISP2P16562 243 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 QSER1Q2KHR3 1735 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 DUXBA0A1W2PPF3 345 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 SRSF10O75494 262 aaKnown RBP9.58□□□□□ -0.88
VAPB-204ENST00000475243 MESP2Q0VG99 397 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 NCMAPQ5T1S8 102 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 C16orf82Q7Z2V1 217 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 SLC35E3Q7Z769 313 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 OR2T10Q8NGZ9 312 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 ZNF721Q8TF20 911 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 ZNF426Q9BUY5 554 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 SEC11CQ9BY50 192 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 OPN3Q9H1Y3 402 aaPredicted RBP9.58□□□□□ -0.88
VAPB-204ENST00000475243 PRSS50Q9UI38 385 aa9.58□□□□□ -0.88
VAPB-204ENST00000475243 DOCK8Q8NF50 2099 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 HELTA6NFD8 242 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 PAGE4O60829 102 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 EFNB2P52799 333 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 SCAND1P57086 179 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 TMEM171Q8WVE6 324 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 IGKV3D-15A0A087WSY6 115 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 J3QR06 171 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 IGKV3-15P01624 115 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 PRF1P14222 555 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 PPOXP50336 477 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 PAFAH1B2P68402 229 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 CEBPEQ15744 281 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 BSXQ3C1V8 233 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 DOLPP1Q86YN1 238 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 MUC15Q8N387 334 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 MS4A7Q9GZW8 240 aaPredicted RBP9.57□□□□□ -0.88
VAPB-204ENST00000475243 HEXA-AS1Q9H8Q6 139 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 CHODLQ9H9P2 273 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 RCC2Q9P258 522 aaKnown RBP9.57□□□□□ -0.88
VAPB-204ENST00000475243 NAT8Q9UHE5 227 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 RGPD3A6NKT7 1758 aaPredicted RBP9.57□□□□□ -0.88
VAPB-204ENST00000475243 A0A1W2PQF6 199 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 H3BVH4 76 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 ZNF253O75346 499 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 ZNF841Q6ZN19 808 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 Q6ZN92 141 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 LDLRAD3Q86YD5 345 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 OR5A2Q8NGI9 324 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 PGLYRP3Q96LB9 341 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 PARP11Q9NR21 331 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 SPTA1P02549 2419 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 C5orf52A6NGY3 159 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 SYNGR1O43759 233 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 CIDEAO60543 219 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 P2RY1P47900 373 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 DLK1P80370 383 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 C19orf57Q0VDD7 668 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 HSF4Q9ULV5 492 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 OR2W1Q9Y3N9 320 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 OR51B2Q9Y5P1 312 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 IGKV1D-16P01601 117 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 HOXA4Q00056 320 aaPredicted RBP9.57□□□□□ -0.88
VAPB-204ENST00000475243 ZPLD1Q8TCW7 415 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 SNX22Q96L94 193 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 NPAS1Q99742 590 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 CES1P1Q9UKY3 287 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 HAX1O00165 279 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 TMEM50BP56557 158 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 HIST3H3Q16695 136 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 ABHD14BQ96IU4 210 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 CCL13Q99616 98 aa9.57□□□□□ -0.88
VAPB-204ENST00000475243 SPTBN1Q01082 2364 aaKnown RBP9.57□□□□□ -0.88
VAPB-204ENST00000475243 BGLAPP02818 100 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 TMEM255AQ5JRV8 349 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 SLC22A18ASQ8N1D0 253 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 OR11H7Q8NGC8 314 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 STARD4Q96DR4 205 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 GMPPAQ96IJ6 420 aaPredicted RBP9.56□□□□□ -0.88
VAPB-204ENST00000475243 YLPM1P49750 1951 aaKnown RBP9.56□□□□□ -0.88
VAPB-204ENST00000475243 PRDX2P32119 198 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 EIF4E3Q8N5X7 224 aaKnown RBP9.56□□□□□ -0.88
VAPB-204ENST00000475243 HMSDA8MTL9 139 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 FOXS1O43638 330 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 NAT2P11245 290 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 KCNMB1Q16558 191 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 INO80CQ6PI98 192 aaPredicted RBP9.56□□□□□ -0.88
VAPB-204ENST00000475243 SLC25A42Q86VD7 318 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 TCTEX1D1Q8N7M0 179 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 KLHDC2Q9Y2U9 406 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 IGHV3OR16-12A0A075B7B8 117 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 NKX2-8O15522 239 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 VDAC1P21796 283 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 RAG2P55895 527 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 LOXL3P58215 753 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 SLC35B1P78383 322 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 C11orf91Q3C1V1 193 aa9.56□□□□□ -0.88
VAPB-204ENST00000475243 AWAT1Q58HT5 328 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms