RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 METTL8Q9H825 291 aaKnown RBP9.65□□□□□ -0.86
CLIP2-204ENST00000474962 RAB9BQ9NP90 201 aa9.65□□□□□ -0.86
CLIP2-204ENST00000474962 KCNIP1Q9NZI2 227 aa9.65□□□□□ -0.86
CLIP2-204ENST00000474962 HSF4Q9ULV5 492 aa9.65□□□□□ -0.86
CLIP2-204ENST00000474962 UBE2J1Q9Y385 318 aaPredicted RBP9.65□□□□□ -0.86
CLIP2-204ENST00000474962 RNF114Q9Y508 228 aa9.65□□□□□ -0.86
CLIP2-204ENST00000474962 A0A0A6YYD4 124 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 MEX3AA1L020 520 aaKnown RBP9.64□□□□□ -0.87
CLIP2-204ENST00000474962 MEIOCA2RUB1 952 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 FAM25AB3EWG3 89 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 FAM25CB3EWG5 89 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 FAM25GB3EWG6 89 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 CD3GP09693 182 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 CCL3L1P16619 93 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 GZMHP20718 246 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 TALDO1P37837 337 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 ERVFRD-1P60508 538 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 PLA2G7Q13093 441 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 DYNC1I2Q13409 638 aaKnown RBP9.64□□□□□ -0.87
CLIP2-204ENST00000474962 ARFRP1Q13795 201 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 ZNF273Q14593 569 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 RSBN1Q5VWQ0 802 aaPredicted RBP9.64□□□□□ -0.87
CLIP2-204ENST00000474962 TRAT1Q6PIZ9 186 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 ZNF497Q6ZNH5 498 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 OR4K15Q8NH41 348 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 SETD6Q8TBK2 473 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 DGCR14Q96DF8 476 aaKnown RBP9.64□□□□□ -0.87
CLIP2-204ENST00000474962 COQ2Q96H96 371 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 CITED1Q99966 193 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 CMSS1Q9BQ75 279 aaKnown RBP9.64□□□□□ -0.87
CLIP2-204ENST00000474962 SULT4A1Q9BR01 284 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 PECRQ9BY49 303 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 DPAGT1Q9H3H5 408 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 HEXA-AS1Q9H8Q6 139 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 TAS2R3Q9NYW6 316 aa9.64□□□□□ -0.87
CLIP2-204ENST00000474962 ZNF729A6NN14 1252 aaPredicted RBP9.63□□□□□ -0.87
CLIP2-204ENST00000474962 ZNF701M0R085 212 aaPredicted RBP9.63□□□□□ -0.87
CLIP2-204ENST00000474962 RAB27BO00194 218 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 RGS5O15539 181 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 MT-ND4P03905 459 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 FBP1P09467 338 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 PAX6P26367 422 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 SAA4P35542 130 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 MNDAP41218 407 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 UBE2E1P51965 193 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 TMEM50BP56557 158 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 PAX5Q02548 391 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 CDNFQ49AH0 187 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 C6orf183Q5T699 404 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 NCR3LG1Q68D85 454 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 OR52W1Q6IF63 320 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 HCP5Q6MZN7 132 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 Q6ZSV7 163 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 MRGPRDQ8TDS7 321 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 CORO2AQ92828 525 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 AJUBAQ96IF1 538 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 CMTM3Q96MX0 182 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 CCDC59Q9P031 241 aaKnown RBP9.63□□□□□ -0.87
CLIP2-204ENST00000474962 ZNRD1Q9P1U0 126 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 ADAM30Q9UKF2 790 aa9.63□□□□□ -0.87
CLIP2-204ENST00000474962 DSCAML1Q8TD84 2053 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 TRAV18A0A075B6X5 111 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 A0A0A6YYH2 397 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 DPPA5A6NC42 116 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 A6NJ64 397 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 SERPINE3A8MV23 424 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 SPINT2O43291 252 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 HIST1H1DP16402 221 aaKnown RBP9.62□□□□□ -0.87
CLIP2-204ENST00000474962 GNB3P16520 340 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 PROK1P58294 105 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 RPL15P61313 204 aaKnown RBP9.62□□□□□ -0.87
CLIP2-204ENST00000474962 DEFA6Q01524 100 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 MOGAT2Q3SYC2 334 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 ZNF782Q6ZMW2 699 aaPredicted RBP9.62□□□□□ -0.87
CLIP2-204ENST00000474962 OR13A1Q8NGR1 328 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 OR13D1Q8NGV5 346 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 DYNC2LI1Q8TCX1 351 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 ARL11Q969Q4 196 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 ABCG5Q9H222 651 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 AK3Q9UIJ7 227 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 MGAT4AQ9UM21 535 aa9.62□□□□□ -0.87
CLIP2-204ENST00000474962 TRAV39A0A0B4J263 110 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 KBTBD11-OT1A0A1B0GTJ5 212 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 C17orf98A8MV24 154 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 HPGDSO60760 199 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 CLPXO76031 633 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 APOA1P02647 267 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 RBP4P02753 201 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 GSTP1P09211 210 aaKnown RBP9.61□□□□□ -0.87
CLIP2-204ENST00000474962 IGHV1-8P0DP01 117 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 CDK2P24941 298 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 NFYBP25208 207 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 GNG2P59768 71 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 PITPNAQ00169 270 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 PLAC9Q5JTB6 97 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 TMEM69Q5SWH9 247 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 MOB1BQ7L9L4 216 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 PRR18Q8N4B5 295 aa9.61□□□□□ -0.87
CLIP2-204ENST00000474962 C11orf42Q8N5U0 333 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms