RNA–Protein interactions for RNA: ENST00000474929.1

USP54-211, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 590 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-211ENST00000474929 ARPINQ7Z6K5 226 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 VTCN1Q7Z7D3 282 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 PPP1R27Q86WC6 154 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 OR51L1Q8NGJ5 315 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 FAM162AQ96A26 154 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 BORCS8Q96FH0 119 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 COQ2Q96H96 371 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 USMG5Q96IX5 58 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 KCTD14Q9BQ13 255 aaPredicted RBP5.91□□□□□ -1.46
USP54-211ENST00000474929 COMMD4Q9H0A8 199 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 RAB9BQ9NP90 201 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 FAM118AQ9NWS6 357 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 MYRFQ9Y2G1 1151 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 AP3M1Q9Y2T2 418 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 FAM32AQ9Y421 112 aaKnown RBP5.91□□□□□ -1.46
USP54-211ENST00000474929 SNX13Q9Y5W8 968 aa5.91□□□□□ -1.46
USP54-211ENST00000474929 MEIKINA0A087WXM9 373 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 TRAV25A0A0B4J276 109 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 KRTAP29-1A8MX34 341 aaPredicted RBP5.9□□□□□ -1.46
USP54-211ENST00000474929 F8VVB4 439 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 F8VWA3 439 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 FAM229AH3BQW9 127 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 GMNNO75496 209 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 DCTN3O75935 186 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 IGLV3-1P01715 115 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 CGB3P0DN86 165 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 CGB7P0DN87 165 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 SPI1P17947 270 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 KCNJ3P48549 501 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 CX3CL1P78423 397 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 PAX5Q02548 391 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 DYRK1AQ13627 763 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 ATXN7L3Q14CW9 347 aaPredicted RBP5.9□□□□□ -1.46
USP54-211ENST00000474929 ZSCAN26Q16670 478 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 LTC4SQ16873 150 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 TM4SF20Q53R12 229 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 SLC35F1Q5T1Q4 408 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 GLYATQ6IB77 296 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 C8orf82Q6P1X6 216 aaPredicted RBP5.9□□□□□ -1.46
USP54-211ENST00000474929 DEGS2Q6QHC5 323 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 HACD2Q6Y1H2 254 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 Q6ZSN1 163 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 BVESQ8NE79 360 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 NPBQ8NG41 125 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 OR1L6Q8NGR2 347 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 OR51E1Q8TCB6 317 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 GALNT14Q96FL9 552 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 NSL1Q96IY1 281 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 RBFOX1Q9NWB1 397 aaKnown RBP5.9□□□□□ -1.46
USP54-211ENST00000474929 NUFIP1Q9UHK0 495 aaKnown RBP5.9□□□□□ -1.46
USP54-211ENST00000474929 TAGLN3Q9UI15 199 aa5.9□□□□□ -1.46
USP54-211ENST00000474929 TMEM269A0A1B0GVZ9 245 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 C2orf70A6NJV1 201 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 MPTX1A8MV57 137 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 B2RBV5 119 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 ZNF736B4DX44 427 aaPredicted RBP5.89□□□□□ -1.47
USP54-211ENST00000474929 NDUFAB1O14561 156 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 TGOLN2O43493 480 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 LANCL1O43813 399 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 HTR3BO95264 441 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 FAM107AO95990 144 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 IFNGP01579 166 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 FOLR2P14207 255 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 DUSP1P28562 367 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 SMIM11AP58511 58 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 UTF1Q5T230 341 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 SLC25A48Q6ZT89 311 aaKnown RBP5.89□□□□□ -1.47
USP54-211ENST00000474929 C5orf24Q7Z6I8 188 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 DEFB107AQ8IZN7 70 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 TMEM61Q8N0U2 210 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 C6orf223Q8N319 242 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 SLC37A3Q8NCC5 494 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 CCDC197Q8NCU1 140 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 OR51T1Q8NGJ9 327 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 OR11H2Q8NH07 326 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 OR4A5Q8NH83 315 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 OTOSQ8NHW6 89 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 HSH2DQ96JZ2 352 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 FAM210BQ96KR6 192 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 TMEM68Q96MH6 324 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 RDH12Q96NR8 316 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 PBOV1Q9GZY1 135 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 MAP6D1Q9H9H5 199 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 HMG20AQ9NP66 347 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 FAM206AQ9NX38 181 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 IL36RNQ9UBH0 155 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 BAIAP2Q9UQB8 552 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 GSTK1Q9Y2Q3 226 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 ENPP4Q9Y6X5 453 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 V9GYQ6 96 aa5.89□□□□□ -1.47
USP54-211ENST00000474929 A0A1W2PPE3 182 aa5.88□□□□□ -1.47
USP54-211ENST00000474929 DIRAS1O95057 198 aa5.88□□□□□ -1.47
USP54-211ENST00000474929 APOL3O95236 402 aa5.88□□□□□ -1.47
USP54-211ENST00000474929 SERPINA3P01011 423 aa5.88□□□□□ -1.47
USP54-211ENST00000474929 ZNF3P17036 446 aa5.88□□□□□ -1.47
USP54-211ENST00000474929 GZMHP20718 246 aa5.88□□□□□ -1.47
USP54-211ENST00000474929 LGALS7P47929 136 aa5.88□□□□□ -1.47
USP54-211ENST00000474929 RBP2P50120 134 aa5.88□□□□□ -1.47
USP54-211ENST00000474929 SNU13P55769 128 aaKnown RBP5.88□□□□□ -1.47
USP54-211ENST00000474929 RBPMS2Q6ZRY4 209 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms