RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 SEBOXQ9HB31 216 aaPredicted RBP3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 RPS10P5Q9NQ39 176 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 PLEKHJ1Q9NW61 149 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 GSKIPQ9P0R6 139 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 ARID1AO14497 2285 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 IGKV1D-8A0A087WSZ0 117 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A0B4J2A0 478 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A0U1RQV5 110 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 hCG_1809904A0A1W2PP81 198 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A1W2PR64 198 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A1W2PRV1 198 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 CXorf65A6NEN9 183 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 CYSRT1A8MQ03 144 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 M0R135 149 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 YIF1AO95070 293 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 SFT2D2O95562 160 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 IGLV3-1P01715 115 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 SOD3P08294 240 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 HOXB5P09067 269 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 OR8U8P0C7N1 319 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 TMEM225BP0DP42 221 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 SELEP16581 610 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 CCNOP22674 350 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 GABRR1P24046 479 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 GCH1P30793 250 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 MTCP1P56278 107 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 TAS2R31P59538 309 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 RAB2AP61019 212 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 FAM189A2Q15884 450 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 SNAI3Q3KNW1 292 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 KRTAP27-1Q3LI81 207 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF718Q3SXZ3 478 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 LINC01559Q495D7 138 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 MBNL2Q5VZF2 373 aaKnown RBP3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 VHLLQ6RSH7 139 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 ZSCAN4Q8NAM6 433 aaPredicted RBP3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 OR2AE1Q8NHA4 323 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 STOML3Q8TAV4 291 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 TCTEX1D2Q8WW35 142 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 TMED6Q8WW62 240 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 GTF3AQ92664 365 aaKnown RBP3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 PHYHIPLQ96FC7 376 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF799Q96GE5 643 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 OR10C1Q96KK4 312 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 SCGB3A2Q96PL1 93 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 TCEAL7Q9BRU2 100 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 HDHD3Q9BSH5 251 aaPredicted RBP3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 FAAP24Q9BTP7 215 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 NMES1Q9C002 83 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 RAB1BQ9H0U4 201 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 GPR173Q9NS66 373 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 EHFQ9NZC4 300 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 SHPKQ9UHJ6 478 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 ANAPC10Q9UM13 185 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 V9GYS6 101 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 CELSR2Q9HCU4 2923 aa3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 FLNBO75369 2602 aaKnown RBP3.54□□□□□ -1.84
GAPVD1-216ENST00000474637 APCP25054 2843 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 TEX13DA0A0J9YY54 714 aaPredicted RBP3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 FAM230AA0A1W2PPH8 454 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 A6NLC8 198 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 DHRS7CA6NNS2 312 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 CEACAM18A8MTB9 384 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 FOXI3A8MTJ6 420 aaPredicted RBP3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 SPRY1O43609 319 aaPredicted RBP3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 ANGPTL7O43827 346 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF205O95201 554 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 SNRNP70P08621 437 aaKnown RBP3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 ACKR3P25106 362 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 OTX1P32242 354 aaPredicted RBP3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 ALDH3B1P43353 468 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 ATP5J2P56134 94 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 KLF3P57682 345 aaPredicted RBP3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 PPP1CBP62140 327 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 MALLQ13021 153 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 RAB32Q13637 225 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 TESK1Q15569 626 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 SSX2Q16385 188 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 TAF9Q16594 264 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 MST1LQ2TV78 715 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 CHRFAM7AQ494W8 412 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 ACTBL2Q562R1 376 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 NKAPLQ5M9Q1 402 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 DRAM2Q6UX65 266 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 SPNS3Q6ZMD2 512 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 PEG10Q86TG7 708 aaKnown RBP3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 LHFPL1Q86WI0 220 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 FOXRED2Q8IWF2 684 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 BAP18Q8IXM2 172 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF561Q8N587 486 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 OR1J1Q8NGS3 322 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 NEU4Q8WWR8 484 aaPredicted RBP3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 PP6455Q8WZ26 134 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 ARL11Q969Q4 196 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 HIST1H2BAQ96A08 127 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 SLAMF9Q96A28 289 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 APOBEC3DQ96AK3 386 aaPredicted RBP3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 C14orf144Q96I85 54 aa3.53□□□□□ -1.84
GAPVD1-216ENST00000474637 DIRC2Q96SL1 478 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms