RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SELLP14151 372 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 PGAM2P15259 253 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 RCC1P18754 421 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-206ENST00000474564 FPR2P25090 351 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 RBMXP38159 391 aaKnown RBP8.57□□□□□ -1.04
COL12A1-206ENST00000474564 HTD2P86397 168 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 LOXL1Q08397 574 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-206ENST00000474564 HMGN3Q15651 99 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 TATDN3Q17R31 274 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 VAX1Q5SQQ9 334 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 TMEM200BQ69YZ2 307 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 IDO2Q6ZQW0 420 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 RTN4RL2Q86UN3 420 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 AKAP14Q86UN6 197 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 OR52M1Q8NGK5 317 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 FAM216AQ8WUB2 273 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 UPRTQ96BW1 309 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 KIRREL1Q96J84 757 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 Q96MF0 132 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 SLC6A7Q99884 636 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 BEX2Q9BXY8 128 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 REG4Q9BYZ8 158 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 TINAGL1Q9GZM7 467 aaPredicted RBP8.57□□□□□ -1.04
COL12A1-206ENST00000474564 BEX1Q9HBH7 125 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 CALYQ9NYX4 217 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 IDI2-AS1Q9NZ38 188 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 ONECUT1Q9UBC0 465 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 CTSZQ9UBR2 303 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 ZNF69Q9UC07 566 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 ANAPC10Q9UM13 185 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 ROS1P08922 2347 aa8.57□□□□□ -1.04
COL12A1-206ENST00000474564 CACNA1DQ01668 2161 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 USP9XQ93008 2570 aaPredicted RBP8.56□□□□□ -1.04
COL12A1-206ENST00000474564 C12orf77C9JDV5 145 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 M0R1W7 72 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 TOR1AO14656 332 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 PHF1O43189 567 aaPredicted RBP8.56□□□□□ -1.04
COL12A1-206ENST00000474564 SSNA1O43805 119 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 PEX14O75381 377 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 SLC22A5O76082 557 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 NDUFB6O95139 128 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 CD74P04233 296 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 HNRNPCP07910 306 aaKnown RBP eCLIP8.56□□□□□ -1.04
COL12A1-206ENST00000474564 SCTP09683 121 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 GATA3P23771 443 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 NFYBP25208 207 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 BTCP35070 178 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 CEACAM6P40199 344 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 GZMKP49863 264 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 PRRX1P54821 245 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 ERVFRD-1P60508 538 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 LMO4P61968 165 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 LCN2P80188 198 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 PLA1AQ53H76 456 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 METTL11BQ5VVY1 283 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 ZNF841Q6ZN19 808 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 C1orf122Q6ZSJ8 110 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 OVCH2Q7RTZ1 564 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 TMED4Q7Z7H5 227 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 OR13A1Q8NGR1 328 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 C8orf46Q8TAG6 207 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 GIMAP1Q8WWP7 306 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 SNAPC3Q92966 411 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 SLC25A21Q9BQT8 299 aaPredicted RBP8.56□□□□□ -1.04
COL12A1-206ENST00000474564 MED28Q9H204 178 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 GHITMQ9H3K2 345 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 HEXA-AS1Q9H8Q6 139 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 C19orf12Q9NSK7 152 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 JPT1Q9UK76 154 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 C14orf166Q9Y224 244 aaKnown RBP8.56□□□□□ -1.04
COL12A1-206ENST00000474564 ALG5Q9Y673 324 aa8.56□□□□□ -1.04
COL12A1-206ENST00000474564 TRAV39A0A0B4J263 110 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 TRAV20A0A0B4J274 112 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 IGHV4-61A0A0C4DH41 118 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 A0A1B0GW55 424 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 A8MXK9 166 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 DUX4L2P0CJ85 424 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 DUX4L3P0CJ86 424 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 DUX4L4P0CJ87 422 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 DUX4L5P0CJ88 424 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 DUX4L6P0CJ89 424 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 DUX4L7P0CJ90 424 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 FCGR2CP31995 323 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 RAB7AP51149 207 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 LUMP51884 338 aaPredicted RBP8.55□□□□□ -1.04
COL12A1-206ENST00000474564 C4orf46Q504U0 113 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 DUX4L9Q6RFH8 374 aaPredicted RBP8.55□□□□□ -1.04
COL12A1-206ENST00000474564 DHRS11Q6UWP2 260 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 HEPN1Q6WQI6 88 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 TEX29Q8N6K0 151 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 KIR3DL3Q8N743 410 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 LINC01356Q8N9X3 169 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 OR2AK2Q8NG84 335 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 OR4D10Q8NGI6 311 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 OR13D1Q8NGV5 346 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 TERB2Q8NHR7 220 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 RFESDQ8TAC1 157 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 ZFAND1Q8TCF1 268 aa8.55□□□□□ -1.04
COL12A1-206ENST00000474564 MARVELD1Q9BSK0 173 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms