RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 PGLYRP3Q96LB9 341 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 MED18Q9BUE0 208 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 HINT2Q9BX68 163 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 TSSK6Q9BXA6 273 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 DMAC2Q9NW81 257 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 STK38LQ9Y2H1 464 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 PUS1Q9Y606 427 aaKnown RBP eCLIP1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 NUP205Q92621 2012 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 ABCB11O95342 1321 aa1.15□□□□□ -2.22
ECHDC1-213ENST00000474240 USP42Q9H9J4 1324 aaKnown RBP1.15□□□□□ -2.22
ECHDC1-213ENST00000474240 LOC102725191A0A1B0GVB3 256 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 A0A1B0GW15 77 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 NDUFS8O00217 210 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 LIN7AO14910 233 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 LDOC1O95751 146 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 APOA1P02647 267 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 GPX1P07203 203 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 CRYGDP07320 174 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 NQO2P16083 231 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 CD36P16671 472 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 TSPOP30536 169 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 OR2B6P58173 313 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 SKP2Q13309 424 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 OR8G1Q15617 311 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 DEFB119Q8N690 84 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 CD200R1Q8TD46 325 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 DCANP1Q8TF63 244 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 LRRC39Q96DD0 335 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 MRAP2Q96G30 205 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 ALX4Q9H161 411 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 CXCL16Q9H2A7 254 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 NDUFB11Q9NX14 153 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 FAM206AQ9NX38 181 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 SCML1Q9UN30 329 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 TBL2Q9Y4P3 447 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 AK9Q5TCS8 1911 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 PTPRJQ12913 1337 aa1.15□□□□□ -2.23
ECHDC1-213ENST00000474240 GRIFINA4D1Z8 144 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 ODF3BA8MYP8 253 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 EFCAB9A8MZ26 197 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 H3BSA7 217 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 LTAP01374 205 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 S100A9P06702 114 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 SLC25A16P16260 332 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 ZNF7P17097 686 aaPredicted RBP1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 GADD45AP24522 165 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 CD200P41217 278 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 CARD18P57730 90 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 HTR4Q13639 388 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 SDIM1Q6ZPB5 146 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 VN1R4Q7Z5H5 301 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 ZNRF2Q8NHG8 242 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 RAB1BQ9H0U4 201 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 SMDT1Q9H4I9 107 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 IFT46Q9NQC8 304 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 TAS2R13Q9NYV9 303 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 TMEM216Q9P0N5 145 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 DNAJC12Q9UKB3 198 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 HEY1Q9Y5J3 304 aa1.14□□□□□ -2.23
ECHDC1-213ENST00000474240 VWDEQ8N2E2 1590 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 COL11A1P12107 1806 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 MYO9BQ13459 2157 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 ZNF860A6NHJ4 632 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 PHYHO14832 338 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 CDK14O94921 469 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 PPP1CCP36873 323 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 SULT1A2P50226 295 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 EXOC3L4Q17RC7 722 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 FBXO48Q5FWF7 155 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 AHSA2Q719I0 299 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 NATD1Q8N6N6 113 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 OR5D18Q8NGL1 313 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 OR9I1Q8NGQ6 314 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 OR2AE1Q8NHA4 323 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 OR5K1Q8NHB7 308 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 TMBIM1Q969X1 311 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 C1QTNF6Q9BXI9 259 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 FBXL15Q9H469 300 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 STRCP1A6NGW2 1772 aa1.13□□□□□ -2.23
ECHDC1-213ENST00000474240 MYO5BQ9ULV0 1848 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 DOCK6Q96HP0 2047 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 DHRS12A0PJE2 317 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 LINC00862A6NCI5 91 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 CDIPTO14735 213 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 PRB1P04280 392 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 TPM1P09493 284 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 CTSEP14091 401 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 GABRA4P48169 554 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 EMP2P54851 167 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 ATP5J2P56134 94 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 GTF2BQ00403 316 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 C18orf21Q32NC0 220 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 HENMT1Q5T8I9 393 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 SLC13A5Q86YT5 568 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 ATP6V1C2Q8NEY4 427 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 OR4P4Q8NGL7 312 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 LHFPL5Q8TAF8 219 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 CACNG8Q8WXS5 425 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 OR52B2Q96RD2 323 aa1.12□□□□□ -2.23
ECHDC1-213ENST00000474240 ZNF251Q9BRH9 671 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms