RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 GHRLQ9UBU3 117 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 TRAPPC2LQ9UL33 140 aa14.32□□□□□ -0.12
UPF3A-203ENST00000474056 UBE2QL1A1L167 161 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 SH2D7A6NKC9 451 aaPredicted RBP14.31□□□□□ -0.12
UPF3A-203ENST00000474056 FAM90A9PA6NNJ1 464 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 C12orf77C9JDV5 145 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 SNRNP70P08621 437 aaKnown RBP14.31□□□□□ -0.12
UPF3A-203ENST00000474056 VSIG8P0DPA2 414 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 FUT3P21217 361 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 TPBGQ13641 420 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 ABCA11PQ4W5N1 156 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 C1orf100Q5SVJ3 147 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 TMEM91Q6ZNR0 172 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 PRSS48Q7RTY5 328 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 GAPTQ8N292 157 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 DRAM1Q8N682 238 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 OR52M1Q8NGK5 317 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 CST11Q9H112 138 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 ISYNA1Q9NPH2 558 aa14.31□□□□□ -0.12
UPF3A-203ENST00000474056 NOTCH1P46531 2555 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 MEGF8Q7Z7M0 2845 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 HSD17B6O14756 317 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 PDCD6O75340 191 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 PEX14O75381 377 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 AMY1AP04745 511 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 AMY2AP04746 511 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 UBBP0CG47 229 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 RAB7AP51149 207 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 DEFA6Q01524 100 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 MLLT11Q13015 90 aaPredicted RBP14.3□□□□□ -0.12
UPF3A-203ENST00000474056 C6orf183Q5T699 404 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 LINC00311Q8N616 119 aa14.3□□□□□ -0.12
UPF3A-203ENST00000474056 SLC31A2O15432 143 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 ATP6V1G2O95670 118 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 GLAP06280 429 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 LPLP06858 475 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 CD37P11049 281 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 CPEP16870 476 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 RCC1P18754 421 aaPredicted RBP14.29□□□□□ -0.12
UPF3A-203ENST00000474056 HTR2CP28335 458 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 ZNF816Q0VGE8 651 aaPredicted RBP14.29□□□□□ -0.12
UPF3A-203ENST00000474056 UNC119Q13432 240 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 NSUN5P1Q3KNT7 163 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 NKAPLQ5M9Q1 402 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 THNSL2Q86YJ6 484 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 OR8H3Q8N146 312 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 PRR18Q8N4B5 295 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 OR1L1Q8NH94 360 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 GFI1Q99684 422 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 NICN1Q9BSH3 213 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 TMEM59Q9BXS4 323 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 MOB4Q9Y3A3 225 aa14.29□□□□□ -0.12
UPF3A-203ENST00000474056 TMEM14DPA8MWL7 114 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 SLC22A1O15245 554 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 SPINT2O43291 252 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 CA11O75493 328 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 HBZP02008 142 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 FAM106CPP0CH98 169 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 CHATP28329 748 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 REG1BP48304 166 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 RPS27AP62979 156 aaKnown RBP14.28□□□□□ -0.12
UPF3A-203ENST00000474056 HES1Q14469 280 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 C5orf24Q7Z6I8 188 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 ZNF439Q8NDP4 499 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 OR10V1Q8NGI7 309 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 MRPL30Q8TCC3 161 aaKnown RBP14.28□□□□□ -0.12
UPF3A-203ENST00000474056 MGLLQ99685 303 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 CITED2Q99967 270 aaPredicted RBP14.28□□□□□ -0.12
UPF3A-203ENST00000474056 SULT4A1Q9BR01 284 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 MBNL3Q9NUK0 354 aaKnown RBP14.28□□□□□ -0.12
UPF3A-203ENST00000474056 RAB26Q9ULW5 256 aa14.28□□□□□ -0.12
UPF3A-203ENST00000474056 IGHV1-3A0A0C4DH29 117 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 ADARB2-AS1A8MUL3 147 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 CCRL2O00421 344 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 IGKV1D-33P01593 117 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 IGKV1-33P01594 117 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 TMEM11P17152 192 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 QRFPP83859 136 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 FABP5Q01469 135 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 HNF4GQ14541 408 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 TRAM1Q15629 374 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 TBCEQ15813 527 aaPredicted RBP14.27□□□□□ -0.13
UPF3A-203ENST00000474056 Q3ZCU0 254 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 C9orf152Q5JTZ5 239 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 TRAT1Q6PIZ9 186 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 C8orf31Q8N9H6 132 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 OR6M1Q8NGM8 313 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 KCNG3Q8TAE7 436 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 NEDD4LQ96PU5 975 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 TM2D1Q9BX74 207 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 TAF9BQ9HBM6 251 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 GNG12Q9UBI6 72 aa14.27□□□□□ -0.13
UPF3A-203ENST00000474056 AK6Q9Y3D8 172 aaKnown RBP14.27□□□□□ -0.13
UPF3A-203ENST00000474056 A0A0A6YYD4 124 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 IGHV3-72A0A0B4J1Y9 119 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 M0QZK8 103 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 BPNT1O95861 308 aa14.26□□□□□ -0.13
UPF3A-203ENST00000474056 GAPDHP04406 335 aaKnown RBP14.26□□□□□ -0.13
UPF3A-203ENST00000474056 PSMA1P25786 263 aaKnown RBP14.26□□□□□ -0.13
UPF3A-203ENST00000474056 ZNF134P52741 427 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms