RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 GNG12Q9UBI6 72 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 VPREB3Q9UKI3 123 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 HSF4Q9ULV5 492 aa11.15□□□□□ -0.62
USF1-205ENST00000473969 TMEM89A2RUT3 159 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 TRIM64CA6NLI5 447 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 C12orf77C9JDV5 145 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 C15orf65H3BRN8 121 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 BUB1B-PAK6H3BSN5 160 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 J3QR06 171 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 LDLRAD4O15165 306 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 GPR137BO60478 399 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 IGHV3-7P01780 117 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 HBZP02008 142 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 RCC1P18754 421 aaPredicted RBP11.14□□□□□ -0.63
USF1-205ENST00000473969 BRS3P32247 399 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 MNDAP41218 407 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 GNG10P50151 68 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 LSM3P62310 102 aaKnown RBP11.14□□□□□ -0.63
USF1-205ENST00000473969 ARL6IP1Q15041 203 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 LY6EQ16553 131 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 HLA-DRB5Q30154 266 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 CCDC144NLQ6NUI1 221 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 MOB1BQ7L9L4 216 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 ZNF554Q86TJ5 538 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 GAPTQ8N292 157 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 OR4P4Q8NGL7 312 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 UBALD1Q8TB05 177 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 MRPL30Q8TCC3 161 aaKnown RBP11.14□□□□□ -0.63
USF1-205ENST00000473969 LEAP2Q969E1 77 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 PTX4Q96A99 478 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 RPEQ96AT9 228 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 RAB3CQ96E17 227 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 ARHGAP5-AS1Q96IT6 56 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 CMSS1Q9BQ75 279 aaKnown RBP11.14□□□□□ -0.63
USF1-205ENST00000473969 ATG5Q9H1Y0 275 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 MMP28Q9H239 520 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 RNF167Q9H6Y7 350 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 TAF9BQ9HBM6 251 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 PITPNC1Q9UKF7 332 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 MGAT4AQ9UM21 535 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 PSG11Q9UQ72 335 aa11.14□□□□□ -0.63
USF1-205ENST00000473969 A0A0A6YYD4 124 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 A0A0B4J203 849 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 F2RL2O00254 374 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 TMEM127O75204 238 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 SCGNO76038 276 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 IGLV1-47P01700 117 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 CD3GP09693 182 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 PAX6P26367 422 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 IL3RAP26951 378 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 IDNKQ5T6J7 187 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 DHRS7BQ6IAN0 325 aaPredicted RBP11.13□□□□□ -0.63
USF1-205ENST00000473969 LIAT1Q6ZQX7 453 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 CROCCP3Q8IVE0 287 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 OR10R2Q8NGX6 335 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 OR4F5Q8NH21 305 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 GALMQ96C23 342 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 AJUBAQ96IF1 538 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 PECRQ9BY49 303 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 MBNL3Q9NUK0 354 aaKnown RBP11.13□□□□□ -0.63
USF1-205ENST00000473969 GFOD1Q9NXC2 390 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 AK3Q9UIJ7 227 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 DSCAML1Q8TD84 2053 aa11.13□□□□□ -0.63
USF1-205ENST00000473969 KIAA2026Q5HYC2 2103 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 IGHV3-43A0A0B4J1X8 118 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 VGLL3A8MV65 326 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 OOSP1A8MZH6 123 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 RGS11O94810 467 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 LPLP06858 475 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 CLEC2LP0C7M8 214 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 IGHV3-43DP0DP04 118 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 SNRPBP14678 240 aaKnown RBP11.12□□□□□ -0.63
USF1-205ENST00000473969 TALDO1P37837 337 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 EFNB2P52799 333 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 TMEM50BP56557 158 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 MADCAM1Q13477 382 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 Q3ZCU0 254 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 TPTE2P1Q5T6R2 138 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 NR2C2APQ86WQ0 139 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 C3orf56Q8N813 242 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 DTX3Q8N9I9 347 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 OR1L1Q8NH94 360 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 CAPSLQ8WWF8 208 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 TOMM40LQ969M1 308 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 BEX1Q9HBH7 125 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 C12orf4Q9NQ89 552 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 OR2S2Q9NQN1 319 aa11.12□□□□□ -0.63
USF1-205ENST00000473969 FBN1P35555 2871 aaKnown RBP11.11□□□□□ -0.63
USF1-205ENST00000473969 COL6A5A8TX70 2615 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 A0A075B6Q4 140 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 A0A1B0GUS0 222 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 POM121CA8CG34 1229 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 RAB13P51153 203 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 DYNLT3P51808 116 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 RAG2P55895 527 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 SCAND1P57086 179 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 PLA2G7Q13093 441 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 DYNAPQ8N1N2 210 aa11.11□□□□□ -0.63
USF1-205ENST00000473969 OR10V1Q8NGI7 309 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms