RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 HMGCS1Q01581 520 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 ERCC8Q13216 396 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 PON3Q15166 354 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 RGNQ15493 299 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 TMEM183BQ1AE95 376 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 C5orf64Q2M2E5 130 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 RPEL1Q2QD12 228 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 DEFB112Q30KQ8 113 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 C9orf129Q5T035 196 aaKnown RBP1.64□□□□□ -2.15
CALD1-216ENST00000473714 NPSR1Q6W5P4 371 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 SSX8Q7RTT4 187 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 SSX6Q7RTT6 188 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 PID1Q7Z2X4 250 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 MYPOPQ86VE0 399 aaPredicted RBP1.64□□□□□ -2.15
CALD1-216ENST00000473714 TMEM183AQ8IXX5 376 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 UMODL1-AS1Q8N2C9 162 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 ZCCHC24Q8N2G6 241 aaKnown RBP1.64□□□□□ -2.15
CALD1-216ENST00000473714 RNF175Q8N4F7 328 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 C11orf42Q8N5U0 333 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 WDR31Q8NA23 367 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 LINC01555Q8NAE3 123 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 OR11H7Q8NGC8 314 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 OR51G1Q8NGK1 321 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 OR5AR1Q8NGP9 310 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 IFT81Q8WYA0 676 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 TFGQ92734 400 aaPredicted RBP1.64□□□□□ -2.15
CALD1-216ENST00000473714 CDKL2Q92772 493 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 RDH5Q92781 318 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 RERGQ96A58 199 aaPredicted RBP1.64□□□□□ -2.15
CALD1-216ENST00000473714 CREB3L1Q96BA8 519 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 TM4SF18Q96CE8 201 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 NRBF2Q96F24 287 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 CENPNQ96H22 339 aaPredicted RBP1.64□□□□□ -2.15
CALD1-216ENST00000473714 LYSMD1Q96S90 227 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 PYGO2Q9BRQ0 406 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 UQCC2Q9BRT2 126 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 PARP12Q9H0J9 701 aaKnown RBP1.64□□□□□ -2.15
CALD1-216ENST00000473714 RAB1BQ9H0U4 201 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 OR52A5Q9H2C5 316 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 PLSCR3Q9NRY6 295 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 DMAC2Q9NW81 257 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 CFL2Q9Y281 166 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 HYOU1Q9Y4L1 999 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 CACNG2Q9Y698 323 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 KCNE3Q9Y6H6 103 aa1.64□□□□□ -2.15
CALD1-216ENST00000473714 SORL1Q92673 2214 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 A0A1B0GW15 77 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ZNF99A8MXY4 864 aaPredicted RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 ANKRD65E5RJM6 399 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 DFFAO00273 331 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 NPIPB7O75200 414 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 GCM2O75603 506 aaPredicted RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 MYO1DO94832 1006 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 MOSP00540 346 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 GCGP01275 180 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 IGLV1-47P01700 117 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 TPM3P06753 285 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 KLK1P06870 262 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 PIRTP0C851 137 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 CD37P11049 281 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 CRISP2P16562 243 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 RAB3AP20336 220 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 CD9P21926 228 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 IVDP26440 423 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 PSMB5P28074 263 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ASIPP42127 132 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 RBM34P42696 430 aaKnown RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 CSNK1A1P48729 337 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 PPOXP50336 477 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 IDH3GP51553 393 aaPredicted RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 ZNF121P58317 390 aaPredicted RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 DSTNP60981 165 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 UBE2KP61086 200 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 SNRPFP62306 86 aaKnown RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 SNRPD2P62316 118 aaKnown RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 RAP1AP62834 184 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 TPM4P67936 248 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 BTG2P78543 158 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 IFFO1Q0D2I5 559 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ST3GAL4Q11206 333 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 STX3Q13277 289 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 FAM53BQ14153 422 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ZNF726P1Q15940 193 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ZNF791Q3KP31 576 aaPredicted RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 ORMDL2Q53FV1 153 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 OTPQ5XKR4 325 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 OR2T5Q6IEZ7 315 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 DNAJC24Q6P3W2 148 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ARL9Q6T311 187 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 PLET1Q6UQ28 207 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 WDR82Q6UXN9 313 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 TMPRSS11AQ6ZMR5 421 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 ACP7Q6ZNF0 438 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 KRTAP5-5Q701N2 237 aaPredicted RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 WDFY1Q8IWB7 410 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 SLC30A8Q8IWU4 369 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 FAM86B1Q8N7N1 296 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 DRAXINQ8NBI3 349 aaPredicted RBP1.63□□□□□ -2.15
CALD1-216ENST00000473714 SUMF2Q8NBJ7 301 aa1.63□□□□□ -2.15
CALD1-216ENST00000473714 DEFB108BQ8NET1 73 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms