RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 C8orf31Q8N9H6 132 aa10.4□□□□□ -0.74
SHROOM3-204ENST00000473602 RFESDQ8TAC1 157 aa10.4□□□□□ -0.74
SHROOM3-204ENST00000473602 ARL11Q969Q4 196 aa10.4□□□□□ -0.74
SHROOM3-204ENST00000473602 FAM46BQ96A09 425 aa10.4□□□□□ -0.74
SHROOM3-204ENST00000473602 RPEQ96AT9 228 aa10.4□□□□□ -0.74
SHROOM3-204ENST00000473602 TMEM59Q9BXS4 323 aa10.4□□□□□ -0.74
SHROOM3-204ENST00000473602 PSG11Q9UQ72 335 aa10.4□□□□□ -0.74
SHROOM3-204ENST00000473602 NOTCH3Q9UM47 2321 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 DNAH3Q8TD57 4116 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 VSIG8P0DPA2 414 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 RAB7AP51149 207 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 PSMD7P51665 324 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 RPS27AP62979 156 aaKnown RBP10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 FABP5Q01469 135 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 MADCAM1Q13477 382 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 SIGIRRQ6IA17 410 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 TMEM219Q86XT9 240 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 TOMM40LQ969M1 308 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 TM2D1Q9BX74 207 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 YTHDF1Q9BYJ9 559 aaKnown RBP10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 PRSS22Q9GZN4 317 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 LIN7BQ9HAP6 207 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 TRAPPC2LQ9UL33 140 aa10.39□□□□□ -0.75
SHROOM3-204ENST00000473602 TET2Q6N021 2002 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 TRAV39A0A0B4J263 110 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 TMEM14DPA8MWL7 114 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 SDCBPO00560 298 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 SLC17A2O00624 439 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 SPINT2O43291 252 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 JUNBP17275 347 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 GALP22466 123 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 CALRP27797 417 aaKnown RBP10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 EMX1Q04741 257 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 LTC4SQ16873 150 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 UTF1Q5T230 341 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 SYT6Q5T7P8 510 aaPredicted RBP10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 OR2W3Q7Z3T1 314 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 OR8H3Q8N146 312 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 LINC00311Q8N616 119 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 OR10X1Q8NGY0 326 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 CCDC107Q8WV48 283 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 CAPSLQ8WWF8 208 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 FCGR1BQ92637 280 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 NEDD4LQ96PU5 975 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 ZNF702PQ9H963 129 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 PLGRKTQ9HBL7 147 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 MBNL3Q9NUK0 354 aaKnown RBP10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 NDUFB11Q9NX14 153 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 GFOD1Q9NXC2 390 aa10.38□□□□□ -0.75
SHROOM3-204ENST00000473602 C12orf77C9JDV5 145 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 M0QZK8 103 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 OR2F2O95006 317 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 OPN1MWP04001 364 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 OPN1MW2P0DN77 364 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 OPN1MW3P0DN78 364 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 ARSBP15848 533 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 CHATP28329 748 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 GNG10P50151 68 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 LOXL3P58215 753 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 QRFPP83859 136 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 UNC119Q13432 240 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 HERPUD1Q15011 391 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 SSX1Q16384 188 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 SAMD5Q5TGI4 173 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 UBE2UQ5VVX9 321 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 OR10K2Q6IF99 312 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 CD200R1LQ6Q8B3 271 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 Q6ZTK2 550 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 THNSL2Q86YJ6 484 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 KLHDC1Q8N7A1 406 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 OR4K15Q8NH41 348 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 LEAP2Q969E1 77 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 RBM14Q96PK6 669 aaKnown RBP10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 OCSTAMPQ9BR26 566 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 URM1Q9BTM9 101 aaKnown RBP10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 KCNIP1Q9NZI2 227 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 SIGLEC9Q9Y336 463 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 AK6Q9Y3D8 172 aaKnown RBP10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 LRRC42Q9Y546 428 aa10.37□□□□□ -0.75
SHROOM3-204ENST00000473602 TRAV1-2A0A0B4J238 106 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 A0A1W2PPI3 338 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 UBE2QL1A1L167 161 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 FAM90A9PA6NNJ1 464 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 CCRL2O00421 344 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 PDCD5O14737 125 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 IGHV3-7P01780 117 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 FAM106CPP0CH98 169 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 IL3RAP26951 378 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 ZNF816Q0VGE8 651 aaPredicted RBP10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 RAB11BQ15907 218 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 NKAPLQ5M9Q1 402 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 STEAP3Q658P3 488 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 REC114Q7Z4M0 266 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 MRAPQ8TCY5 172 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 GFI1Q99684 422 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 SLC25A33Q9BSK2 321 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 SERTAD4Q9NUC0 356 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 GNG12Q9UBI6 72 aa10.36□□□□□ -0.75
SHROOM3-204ENST00000473602 V9GY05 133 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms