RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 PLXNA3P51805 1871 aa1.6□□□□□ -2.15
PTCD3-209ENST00000472044 BAHCC1Q9P281 2608 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 EFCAB9A8MZ26 197 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 HSBP1L1C9JCN9 74 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 SULT1C2O00338 296 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 SYNGR1O43759 233 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 TNFAIP8O95379 198 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 CRABP1P29762 137 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 FAM3AP98173 230 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 VN1R4Q7Z5H5 301 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 OR10P1Q8NGE3 313 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 OR5D18Q8NGL1 313 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 GALMQ96C23 342 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 DMAC2Q9NW81 257 aa1.59□□□□□ -2.15
PTCD3-209ENST00000472044 MAP3K19Q56UN5 1328 aa1.59□□□□□ -2.16
PTCD3-209ENST00000472044 ATG2BQ96BY7 2078 aa1.59□□□□□ -2.16
PTCD3-209ENST00000472044 ADAMTS7Q9UKP4 1686 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 IQCF5A8MTL0 148 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 J3QLI3 93 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 SLC25A20O43772 301 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 CTSEP14091 401 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 CBR1P16152 277 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 HENMT1Q5T8I9 393 aaKnown RBP1.58□□□□□ -2.16
PTCD3-209ENST00000472044 NIPAL1Q6NVV3 410 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 TCF23Q7RTU1 214 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 ZFAND2AQ8N6M9 145 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 OR4P4Q8NGL7 312 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 OR11L1Q8NGX0 322 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 OR2V1Q8NHB1 315 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 DYNC2LI1Q8TCX1 351 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 FAM210AQ96ND0 272 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 C11orf49Q9H6J7 331 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 DSCAML1Q8TD84 2053 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 TRIOBPQ9H2D6 2365 aa1.58□□□□□ -2.16
PTCD3-209ENST00000472044 C17orf98A8MV24 154 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 MKRN2OSH3BPM6 223 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 KLRC4-KLRK1H3BQV0 150 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 H3BSA7 217 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 TP53I11O14683 189 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 NEMFO60524 1076 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 FBP1P09467 338 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 RCVRNP35243 200 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 ACTR1BP42025 376 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 STC1P52823 247 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 RAB8AP61006 207 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 GTF2BQ00403 316 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 SLAMF1Q13291 335 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 XRCC4Q13426 336 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 EXOC3L4Q17RC7 722 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 ZNF181Q2M3W8 571 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 EBLN2Q6P2I7 272 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 ZNF322Q6U7Q0 402 aaPredicted RBP1.57□□□□□ -2.16
PTCD3-209ENST00000472044 MSRB3Q8IXL7 192 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 SYCE1Q8N0S2 351 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 MFSD8Q8NHS3 518 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 ANGPTL6Q8NI99 470 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 GPR119Q8TDV5 335 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 TAMM41Q96BW9 452 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 POTEKPQ9BYX7 375 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 CHST5Q9GZS9 411 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 TUBA4BQ9H853 241 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 ASCL3Q9NQ33 180 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 ZNF337Q9Y3M9 751 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 OR51B4Q9Y5P0 310 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 HSPE1-MOB4S4R3N1 261 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 LRPPRCP42704 1394 aaKnown RBP1.57□□□□□ -2.16
PTCD3-209ENST00000472044 ADAMTSL1Q8N6G6 1762 aa1.57□□□□□ -2.16
PTCD3-209ENST00000472044 ITGB4P16144 1822 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 ICE1Q9Y2F5 2266 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 C17orf51A8MQB3 221 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 A8MWP6 167 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 F5H5K5 113 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 LIN7AO14910 233 aaPredicted RBP1.56□□□□□ -2.16
PTCD3-209ENST00000472044 CYTH3O43739 400 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 SCN2BO60939 215 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 SYT1P21579 422 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 GADD45AP24522 165 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 KDELR2P33947 212 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 PSG4Q00888 419 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 CLEC6AQ6EIG7 209 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 SDIM1Q6ZPB5 146 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 ZBTB8OSQ8IWT0 167 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 C2orf73Q8N5S3 287 aaPredicted RBP1.56□□□□□ -2.16
PTCD3-209ENST00000472044 OR5AK3PQ8NH89 298 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 OR5K1Q8NHB7 308 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 RNASEH2CQ8TDP1 164 aaKnown RBP1.56□□□□□ -2.16
PTCD3-209ENST00000472044 CCDC12Q8WUD4 166 aaPredicted RBP1.56□□□□□ -2.16
PTCD3-209ENST00000472044 TMEM56Q96MV1 263 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 MED10Q9BTT4 135 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 METTL17Q9H7H0 456 aaPredicted RBP1.56□□□□□ -2.16
PTCD3-209ENST00000472044 UBQLN4Q9NRR5 601 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 TMEM216Q9P0N5 145 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 FBXL3Q9UKT7 428 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 CLUHO75153 1309 aa1.56□□□□□ -2.16
PTCD3-209ENST00000472044 STRCP1A6NGW2 1772 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 B4DEV8 164 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 C9J4A7 227 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 M0QX08 132 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 MPZL2O60487 215 aa1.55□□□□□ -2.16
PTCD3-209ENST00000472044 RAB36O95755 333 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms