RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 AWAT2Q6E213 333 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 RAB12Q6IQ22 244 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 OR2W3Q7Z3T1 314 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 FOXRED2Q8IWF2 684 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 OR2T10Q8NGZ9 312 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 ETAA1Q9NY74 926 aa17.8■□□□□ 0.44
C9orf3-213ENST00000471978 C12orf77C9JDV5 145 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 SPINT2O43291 252 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 Q3ZCU0 254 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 ETV3LQ6ZN32 361 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 TGIF2LXQ8IUE1 241 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 CDH26Q8IXH8 852 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 MRPL41Q8IXM3 137 aaKnown RBP17.79■□□□□ 0.44
C9orf3-213ENST00000471978 STPG2Q8N412 459 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 Q8N6K4 173 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 OR4K15Q8NH41 348 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 RTN4IP1Q8WWV3 396 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-213ENST00000471978 ST6GALNAC6Q969X2 333 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 DERL3Q96Q80 235 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 BANF2Q9H503 90 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 ZFP57Q9NU63 452 aa17.79■□□□□ 0.44
C9orf3-213ENST00000471978 CNOT2Q9NZN8 540 aaKnown RBP17.79■□□□□ 0.44
C9orf3-213ENST00000471978 LINC01548A6NM66 108 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 NUDT19A8MXV4 375 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 SLC31A2O15432 143 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 CAPGP40121 348 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 THBS3P49746 956 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 KRTAP10-11P60412 298 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 C6orf183Q5T699 404 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 C18orf65Q6ZTR6 163 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 PRR18Q8N4B5 295 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 COMMD1Q8N668 190 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 SELENOIQ9C0D9 397 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 RAB9BQ9NP90 201 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 GNG12Q9UBI6 72 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 PEX16Q9Y5Y5 336 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 COL7A1Q02388 2944 aa17.78■□□□□ 0.44
C9orf3-213ENST00000471978 K7EIL1 84 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 MYL12BO14950 172 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 GNAO1P09471 354 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 MGMTP16455 207 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 CELP19835 753 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 CD1BP29016 333 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 GPR12P47775 334 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 DOC2BQ14184 412 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 RCN1Q15293 331 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 SLC25A48Q6ZT89 311 aaKnown RBP17.77■□□□□ 0.44
C9orf3-213ENST00000471978 C8orf86Q6ZUL3 223 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 C8orf59Q8N0T1 100 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-213ENST00000471978 ZNF439Q8NDP4 499 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 TMEM104Q8NE00 496 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 KLHL30-AS1Q8NEE0 82 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 OR10V1Q8NGI7 309 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 ABCG5Q9H222 651 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 LIN7CQ9NUP9 197 aaKnown RBP17.77■□□□□ 0.44
C9orf3-213ENST00000471978 PSORS1C1Q9UIG5 152 aa17.77■□□□□ 0.44
C9orf3-213ENST00000471978 FAM90A10PA6NDY2 464 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 FAM90A7PA6NKC0 464 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 FAM90A23PA8MXZ1 464 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 ZNF736B4DX44 427 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-213ENST00000471978 AP4M1O00189 453 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 CRTAPO75718 401 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-213ENST00000471978 MOSP00540 346 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 HBZP02008 142 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 CD1AP06126 327 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 SLC6A1P30531 599 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 HOXD3P31249 432 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-213ENST00000471978 ZNF134P52741 427 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 WNT4P56705 351 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 TMEM30BQ3MIR4 351 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 LAIR2Q6ISS4 152 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 AHSA2Q719I0 299 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 GAPTQ8N292 157 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 Q8N9W7 124 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 OR1L1Q8NH94 360 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 GPR61Q9BZJ8 451 aa17.76■□□□□ 0.43
C9orf3-213ENST00000471978 TXNL1O43396 289 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 RCC1P18754 421 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-213ENST00000471978 FUT3P21217 361 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 VHLP40337 213 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 EGFEM1PQ0D2K5 195 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 CT45A1Q5HYN5 189 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 TEX38Q6PEX7 206 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 TRAT1Q6PIZ9 186 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 LYPD6Q86Y78 171 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 NKAIN3Q8N8D7 197 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 BPIFB6Q8NFQ5 453 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 CT45A3Q8NHU0 189 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 DPF1Q92782 380 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 Q96M66 194 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 PLSCR3Q9NRY6 295 aa17.75■□□□□ 0.43
C9orf3-213ENST00000471978 WI2-2373I1.2A0A1W2PRP0 233 aa17.74■□□□□ 0.43
C9orf3-213ENST00000471978 UBE2QL1A1L167 161 aa17.74■□□□□ 0.43
C9orf3-213ENST00000471978 CA11O75493 328 aa17.74■□□□□ 0.43
C9orf3-213ENST00000471978 SC5DO75845 299 aa17.74■□□□□ 0.43
C9orf3-213ENST00000471978 MYCNOSP40205 109 aa17.74■□□□□ 0.43
C9orf3-213ENST00000471978 ZNF137PP52743 207 aa17.74■□□□□ 0.43
C9orf3-213ENST00000471978 PNLIPRP3Q17RR3 467 aa17.74■□□□□ 0.43
C9orf3-213ENST00000471978 DEFB121Q5J5C9 76 aa17.74■□□□□ 0.43
C9orf3-213ENST00000471978 ZNF695Q8IW36 515 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms