RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, human

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-208	ENST00000470045	ETAA1	Q9NY74	926 aa		11.22	□□□□□ -0.61
COMMD3-208	ENST00000470045	PEX16	Q9Y5Y5	336 aa		11.22	□□□□□ -0.61
COMMD3-208	ENST00000470045	C12orf77	C9JDV5	145 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045		M0QZK8	103 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	SDCBP	O00560	298 aa	Predicted RBP	11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	SLC22A1	O15245	554 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	KCNAB3	O43448	404 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	PDCD6	O75340	191 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	VSIG8	P0DPA2	414 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	SRM	P19623	302 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	VHL	P40337	213 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	MLLT11	Q13015	90 aa	Predicted RBP	11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	HSD17B12	Q53GQ0	312 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	SYT6	Q5T7P8	510 aa	Predicted RBP	11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	GLT8D1	Q68CQ7	371 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	HIST2H2BD	Q6DRA6	164 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	TMEM91	Q6ZNR0	172 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	CEACAM19	Q7Z692	300 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	ZNF439	Q8NDP4	499 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	OR56B4	Q8NH76	319 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	CCDC107	Q8WV48	283 aa		11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045	MBNL3	Q9NUK0	354 aa	Known RBP	11.21	□□□□□ -0.61
COMMD3-208	ENST00000470045		A0A1W2PPE3	182 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	ADARB2-AS1	A8MUL3	147 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	HSD17B6	O14756	317 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	SNRNP70	P08621	437 aa	Known RBP	11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	FAM106CP	P0CH98	169 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	CD28	P10747	220 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	CPE	P16870	476 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	PSMA1	P25786	263 aa	Known RBP	11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	CHAT	P28329	748 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	RPS25	P62851	125 aa	Known RBP	11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	RPS27A	P62979	156 aa	Known RBP	11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	QRFP	P83859	136 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	TRAM1	Q15629	374 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	TBCE	Q15813	527 aa	Predicted RBP	11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	ABCA11P	Q4W5N1	156 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	C6orf183	Q5T699	404 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	TRAT1	Q6PIZ9	186 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	ZNF554	Q86TJ5	538 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	NDUFA11	Q86Y39	141 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	DRAM1	Q8N682	238 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	OR10X1	Q8NGY0	326 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	OR4K15	Q8NH41	348 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	UBALD1	Q8TB05	177 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	CAPSL	Q8WWF8	208 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	ST6GALNAC6	Q969X2	333 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	FAM46B	Q96A09	425 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	TM2D1	Q9BX74	207 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	RAB9B	Q9NP90	201 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	TRAPPC2L	Q9UL33	140 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	MOB4	Q9Y3A3	225 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	PLXNB1	O43157	2135 aa		11.2	□□□□□ -0.62
COMMD3-208	ENST00000470045	TMEM14DP	A8MWL7	114 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	SPINT2	O43291	252 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	MPIG6B	O95866	241 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	HBZ	P02008	142 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	OPN1MW	P04001	364 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	OPN1MW2	P0DN77	364 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	OPN1MW3	P0DN78	364 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	RCC1	P18754	421 aa	Predicted RBP	11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	HTR2C	P28335	458 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	ZNF137P	P52743	207 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	DEFA6	Q01524	100 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	UNC119	Q13432	240 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	EBI3	Q14213	229 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	OR10K2	Q6IF99	312 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	SLC25A48	Q6ZT89	311 aa	Known RBP	11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	OR6M1	Q8NGM8	313 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	MRPL30	Q8TCC3	161 aa	Known RBP	11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	TMEM203	Q969S6	136 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	GFI1	Q99684	422 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	MGLL	Q99685	303 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	TMEM59	Q9BXS4	323 aa		11.19	□□□□□ -0.62
COMMD3-208	ENST00000470045	IGHV3-43	A0A0B4J1X8	118 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	IGHV1-3	A0A0C4DH29	117 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	UBE2QL1	A1L167	161 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	CCRL2	O00421	344 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	FGF16	O43320	207 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	PEX14	O75381	377 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	BPNT1	O95861	308 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	GAPDH	P04406	335 aa	Known RBP	11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	LPL	P06858	475 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	HSMCR30	P0CW71	290 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	IGHV3-43D	P0DP04	118 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	PRR20E	P86478	221 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	PRR20C	P86479	221 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	PRR20D	P86480	221 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	PRR20B	P86481	221 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	PRR20A	P86496	221 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	CD83	Q01151	205 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	IZUMO1	Q8IYV9	350 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	C5orf56	Q8N8D9	126 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	OR1L1	Q8NH94	360 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	KCNG3	Q8TAE7	436 aa		11.18	□□□□□ -0.62
COMMD3-208	ENST00000470045	CNBD2	Q96M20	576 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms