RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CALYQ9NYX4 217 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 DPM3Q9P2X0 92 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 BLOC1S6Q9UL45 172 aa8.97□□□□□ -0.97
COL4A6-205ENST00000468338 NOTOA8MTQ0 251 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 C15orf65H3BRN8 121 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 BUB1B-PAK6H3BSN5 160 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 MRPS14O60783 128 aaKnown RBP8.96□□□□□ -0.98
COL4A6-205ENST00000468338 MT-ND4P03905 459 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 LPLP06858 475 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 UBBP0CG47 229 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 MGMTP16455 207 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 PSMA1P25786 263 aaKnown RBP8.96□□□□□ -0.98
COL4A6-205ENST00000468338 GLP1RP43220 463 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 MAP2K4P45985 399 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 RAB13P51153 203 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 RPS25P62851 125 aaKnown RBP8.96□□□□□ -0.98
COL4A6-205ENST00000468338 QRFPP83859 136 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 FAM189A2Q15884 450 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 LY6EQ16553 131 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 HLA-DRB5Q30154 266 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 HSD17B12Q53GQ0 312 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 NKAPLQ5M9Q1 402 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 GLT8D1Q68CQ7 371 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 ZNF497Q6ZNH5 498 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 SLC16A12Q6ZSM3 486 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 Q8N2B8 174 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 OR9G1Q8NH87 305 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 TMEM203Q969S6 136 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 CREB3L1Q96BA8 519 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 IDI2-AS1Q9NZ38 188 aa8.96□□□□□ -0.98
COL4A6-205ENST00000468338 TMEM30CPA0ZSE6 113 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 LEUTXA8MZ59 168 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 OOSP1A8MZH6 123 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 H3BUI4 141 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 J3QR06 171 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 SLC22A1O15245 554 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 ORC5O43913 435 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 CA11O75493 328 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 HSMCR30P0CW71 290 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 JUNBP17275 347 aaPredicted RBP8.95□□□□□ -0.98
COL4A6-205ENST00000468338 EFNB2P52799 333 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 PRRX1P54821 245 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 GABARAPL2P60520 117 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 EMX1Q04741 257 aaPredicted RBP8.95□□□□□ -0.98
COL4A6-205ENST00000468338 SRSF4Q08170 494 aaKnown RBP8.95□□□□□ -0.98
COL4A6-205ENST00000468338 RBM39Q14498 530 aaKnown RBP8.95□□□□□ -0.98
COL4A6-205ENST00000468338 ATAD3CQ5T2N8 411 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 OR52M1Q8NGK5 317 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 NDNFQ8TB73 568 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 MRGPRDQ8TDS7 321 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 GFI1Q99684 422 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 ARPC5LQ9BPX5 153 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 SELENOIQ9C0D9 397 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 CCDC90BQ9GZT6 254 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 BANF2Q9H503 90 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 ACOT13Q9NPJ3 140 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 PITPNC1Q9UKF7 332 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 PSG11Q9UQ72 335 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 HILPDAQ9Y5L2 63 aa8.95□□□□□ -0.98
COL4A6-205ENST00000468338 TRAV39A0A0B4J263 110 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 FAM172BPA6NC97 362 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 TMEM14DPA8MWL7 114 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 MCRIP1C9JLW8 97 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 F2RL2O00254 374 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 CRTAPO75718 401 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-205ENST00000468338 ARL6IP5O75915 188 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 FUT3P21217 361 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 GABRA5P31644 462 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 SSTR5P35346 364 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 LOXL3P58215 753 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 FABP5Q01469 135 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 UNC119Q13432 240 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 SSX1Q16384 188 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 PLA1AQ53H76 456 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 TPTE2P1Q5T6R2 138 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 RAB12Q6IQ22 244 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 C11orf88Q6PI97 169 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 CD200R1LQ6Q8B3 271 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 ZNF367Q7RTV3 350 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 DTX3Q8N9I9 347 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 OR6M1Q8NGM8 313 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 RFESDQ8TAC1 157 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 TM2D1Q9BX74 207 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 YTHDF1Q9BYJ9 559 aaKnown RBP8.94□□□□□ -0.98
COL4A6-205ENST00000468338 NPFFR1Q9GZQ6 430 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 CST11Q9H112 138 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 MMP28Q9H239 520 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 ABCB10Q9NRK6 738 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
COL4A6-205ENST00000468338 PEX16Q9Y5Y5 336 aa8.94□□□□□ -0.98
COL4A6-205ENST00000468338 FAM90A9PA6NNJ1 464 aa8.93□□□□□ -0.98
COL4A6-205ENST00000468338 SLC17A2O00624 439 aa8.93□□□□□ -0.98
COL4A6-205ENST00000468338 TOR1AO14656 332 aa8.93□□□□□ -0.98
COL4A6-205ENST00000468338 PDCD6O75340 191 aa8.93□□□□□ -0.98
COL4A6-205ENST00000468338 NFYBP25208 207 aa8.93□□□□□ -0.98
COL4A6-205ENST00000468338 CHATP28329 748 aa8.93□□□□□ -0.98
COL4A6-205ENST00000468338 HTR2CP28335 458 aa8.93□□□□□ -0.98
COL4A6-205ENST00000468338 CEACAM3P40198 252 aa8.93□□□□□ -0.98
COL4A6-205ENST00000468338 RPS27AP62979 156 aaKnown RBP8.93□□□□□ -0.98
COL4A6-205ENST00000468338 Q3ZCU0 254 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms