RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ISYNA1Q9NPH2 558 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 GFOD1Q9NXC2 390 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 A0A1W2PPE3 182 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 A0A1W2PPI3 338 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 KCNAB3O43448 404 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 CA11O75493 328 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 AMY1AP04745 511 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 AMY2AP04746 511 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 RAB7AP51149 207 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 DEFA6Q01524 100 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 TMEM95Q3KNT9 176 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 ABCA11PQ4W5N1 156 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 RBM48Q5RL73 367 aaKnown RBP13.64□□□□□ -0.23
SSBP1-207ENST00000468267 IZUMO2Q6UXV1 221 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 PRSS48Q7RTY5 328 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 OR8H3Q8N146 312 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 LINC00311Q8N616 119 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 DRAM1Q8N682 238 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 C8orf31Q8N9H6 132 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 TMEM203Q969S6 136 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 FAM46BQ96A09 425 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 PLA2G2EQ9NZK7 142 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 TRAPPC2LQ9UL33 140 aa13.64□□□□□ -0.23
SSBP1-207ENST00000468267 C12orf77C9JDV5 145 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 SPINT2O43291 252 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 PDCD6O75340 191 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 HSMCR30P0CW71 290 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 C6orf183Q5T699 404 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 TMEM91Q6ZNR0 172 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 OR4K15Q8NH41 348 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 OR56B4Q8NH76 319 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 CCDC90BQ9GZT6 254 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 RAB9BQ9NP90 201 aa13.63□□□□□ -0.23
SSBP1-207ENST00000468267 IGHV3-43A0A0B4J1X8 118 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 UBE2QL1A1L167 161 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 M0QZK8 103 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 MPIG6BO95866 241 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 SNRNP70P08621 437 aaKnown RBP13.62□□□□□ -0.23
SSBP1-207ENST00000468267 IGHV3-43DP0DP04 118 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 VSIG8P0DPA2 414 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 CPEP16870 476 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 EMX1Q04741 257 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-207ENST00000468267 ZNF816Q0VGE8 651 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-207ENST00000468267 MLLT11Q13015 90 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-207ENST00000468267 TRAM1Q15629 374 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 TMEM30BQ3MIR4 351 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 Q3ZCU0 254 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 OR10K2Q6IF99 312 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 FAM53AQ6NSI3 398 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-207ENST00000468267 TRAT1Q6PIZ9 186 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 LYG1Q8N1E2 194 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 CYYR1Q96J86 154 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 CNBD2Q96M20 576 aa13.62□□□□□ -0.23
SSBP1-207ENST00000468267 CCRL2O00421 344 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 HSD17B6O14756 317 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 SLC22A1O15245 554 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 HBZP02008 142 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 GAPDHP04406 335 aaKnown RBP13.61□□□□□ -0.23
SSBP1-207ENST00000468267 LPLP06858 475 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 RCC1P18754 421 aaPredicted RBP13.61□□□□□ -0.23
SSBP1-207ENST00000468267 HTR2CP28335 458 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 MAP2K4P45985 399 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 RPS25P62851 125 aaKnown RBP13.61□□□□□ -0.23
SSBP1-207ENST00000468267 RPS27AP62979 156 aaKnown RBP13.61□□□□□ -0.23
SSBP1-207ENST00000468267 NSUN5P1Q3KNT7 163 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 NDUFA11Q86Y39 141 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 OR5AU1Q8NGC0 362 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 OR1L1Q8NH94 360 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 KCNG3Q8TAE7 436 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 MGLLQ99685 303 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 CITED2Q99967 270 aaPredicted RBP13.61□□□□□ -0.23
SSBP1-207ENST00000468267 MBNL3Q9NUK0 354 aaKnown RBP13.61□□□□□ -0.23
SSBP1-207ENST00000468267 MOB4Q9Y3A3 225 aa13.61□□□□□ -0.23
SSBP1-207ENST00000468267 IGHV1-3A0A0C4DH29 117 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 SH2D7A6NKC9 451 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-207ENST00000468267 ADARB2-AS1A8MUL3 147 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 OPN1MWP04001 364 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 OPN1MW2P0DN77 364 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 OPN1MW3P0DN78 364 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 PSMA1P25786 263 aaKnown RBP13.6□□□□□ -0.23
SSBP1-207ENST00000468267 CHATP28329 748 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 QRFPP83859 136 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 HES1Q14469 280 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 SLC25A48Q6ZT89 311 aaKnown RBP13.6□□□□□ -0.23
SSBP1-207ENST00000468267 CENPVQ7Z7K6 275 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-207ENST00000468267 MOB3BQ86TA1 216 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 ZNF439Q8NDP4 499 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 MRPL30Q8TCC3 161 aaKnown RBP13.6□□□□□ -0.23
SSBP1-207ENST00000468267 ST6GALNAC6Q969X2 333 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 NEDD4LQ96PU5 975 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 GFI1Q99684 422 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 TM2D1Q9BX74 207 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 TMEM59Q9BXS4 323 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 TAF9BQ9HBM6 251 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 GNG12Q9UBI6 72 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 RAB26Q9ULW5 256 aa13.6□□□□□ -0.23
SSBP1-207ENST00000468267 TMEM14DPA8MWL7 114 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 SLC31A2O15432 143 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 ARL6IP5O75915 188 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 BPNT1O95861 308 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms