RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 TEX38Q6PEX7 206 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 ZNF695Q8IW36 515 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 ZFP41Q8N8Y5 198 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 Q8N9W7 124 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 MUL1Q969V5 352 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 ST6GALNAC6Q969X2 333 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 TMEM80Q96HE8 168 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 P2RX4Q99571 388 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 ABCG5Q9H222 651 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 SPACA1Q9HBV2 294 aa15.08■□□□□ 0
COL9A3-206ENST00000466532 MRPS28Q9Y2Q9 187 aaKnown RBP15.08■□□□□ 0
COL9A3-206ENST00000466532 C12orf77C9JDV5 145 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 MCRIP1C9JLW8 97 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 SLC31A2O15432 143 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 MOSP00540 346 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 CD1BP29016 333 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 RPS11P62280 158 aaKnown RBP eCLIP15.07■□□□□ 0
COL9A3-206ENST00000466532 Q3ZCU0 254 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 SYT6Q5T7P8 510 aaPredicted RBP15.07■□□□□ 0
COL9A3-206ENST00000466532 JAGN1Q8N5M9 183 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 TMEM104Q8NE00 496 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 DUX3Q96PT4 197 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 RAB9BQ9NP90 201 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 CHCHD3Q9NX63 227 aaKnown RBP15.07■□□□□ 0
COL9A3-206ENST00000466532 ETAA1Q9NY74 926 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 RCC2Q9P258 522 aaKnown RBP15.07■□□□□ 0
COL9A3-206ENST00000466532 TRAPPC2LQ9UL33 140 aa15.07■□□□□ 0
COL9A3-206ENST00000466532 SPINT2O43291 252 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 RPLP1P05386 114 aaKnown RBP15.06■□□□□ 0
COL9A3-206ENST00000466532 FSTP19883 344 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 PNLIPRP3Q17RR3 467 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 RAB12Q6IQ22 244 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 GLIPR1L1Q6UWM5 242 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 PRR18Q8N4B5 295 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 OR4K15Q8NH41 348 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 CYGBQ8WWM9 190 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 MRPS24Q96EL2 167 aaKnown RBP15.06■□□□□ 0
COL9A3-206ENST00000466532 RAX2Q96IS3 184 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 PGLYRP3Q96LB9 341 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 OR14A2Q96R54 314 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 S1PR3Q99500 378 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 RASL11BQ9BPW5 248 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 GON7Q9BXV9 100 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 GNG12Q9UBI6 72 aa15.06■□□□□ 0
COL9A3-206ENST00000466532 A0A1W2PPK0 400 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 ZNF736B4DX44 427 aaPredicted RBP15.05■□□□□ -0
COL9A3-206ENST00000466532 TXNL1O43396 289 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 RAB25P57735 213 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 CD69Q07108 199 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 GPR50Q13585 617 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 CXorf66Q5JRM2 361 aaPredicted RBP15.05■□□□□ -0
COL9A3-206ENST00000466532 C6orf183Q5T699 404 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 AWAT2Q6E213 333 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 UNQ9370/PRO34162Q6UXP9 181 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 LCNL1Q6ZST4 164 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 SLC25A48Q6ZT89 311 aaKnown RBP15.05■□□□□ -0
COL9A3-206ENST00000466532 ZNF485Q8NCK3 441 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 ZNF439Q8NDP4 499 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 OR10V1Q8NGI7 309 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 DCLRE1BQ9H816 532 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 PLSCR3Q9NRY6 295 aa15.05■□□□□ -0
COL9A3-206ENST00000466532 TRBV5-7A0A0A0MS05 114 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 PNMA8CA0A1B0GUJ8 204 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 H0YHG0 523 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 CCL24O00175 119 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 RRP9O43818 475 aaKnown RBP15.04■□□□□ -0
COL9A3-206ENST00000466532 HBZP02008 142 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 ZNF134P52741 427 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 ZNF137PP52743 207 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 LRRC36Q1X8D7 754 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 TMEM30BQ3MIR4 351 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 TTC23Q5W5X9 447 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 SETD9Q8NE22 299 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 OR8H1Q8NGG4 311 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 OR1L1Q8NH94 360 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 RBMXL1Q96E39 390 aaKnown RBP15.04■□□□□ -0
COL9A3-206ENST00000466532 BANF2Q9H503 90 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 PEX16Q9Y5Y5 336 aa15.04■□□□□ -0
COL9A3-206ENST00000466532 MAS1P04201 325 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 DGCR2P98153 550 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 ST3GAL4Q11206 333 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 FOXE3Q13461 319 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 DEFB136Q30KP8 78 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 CT45A1Q5HYN5 189 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 TRAT1Q6PIZ9 186 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 GAPTQ8N292 157 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 FAM71E2Q8N5Q1 922 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 CT45A3Q8NHU0 189 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 GGHQ92820 318 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 B9D2Q9BPU9 175 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 HSPB9Q9BQS6 159 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 SELENOIQ9C0D9 397 aa15.03■□□□□ -0
COL9A3-206ENST00000466532 ZMAT5Q9UDW3 170 aaKnown RBP15.03■□□□□ -0
COL9A3-206ENST00000466532 KMT2CQ8NEZ4 4911 aaKnown RBP15.02■□□□□ -0
COL9A3-206ENST00000466532 EBAG9O00559 213 aa15.02■□□□□ -0
COL9A3-206ENST00000466532 ELANEP08246 267 aa15.02■□□□□ -0
COL9A3-206ENST00000466532 MGMTP16455 207 aa15.02■□□□□ -0
COL9A3-206ENST00000466532 RCC1P18754 421 aaPredicted RBP15.02■□□□□ -0
COL9A3-206ENST00000466532 SOX6P35712 828 aa15.02■□□□□ -0
COL9A3-206ENST00000466532 CAPGP40121 348 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms