RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 A6NIN4 97 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 SH2D7A6NKC9 451 aaPredicted RBP11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 C17orf98A8MV24 154 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 FAM25AB3EWG3 89 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 FAM25CB3EWG5 89 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 FAM25GB3EWG6 89 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 CTDSP2O14595 271 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 NRASP01111 189 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 AMY1AP04745 511 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 AMY2AP04746 511 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 IGHV1-8P0DP01 117 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 SLC2A2P11168 524 aaPredicted RBP11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 PSG2P11465 335 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 ACKR3P25106 362 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 ZNF93P35789 620 aaPredicted RBP11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 ETV6P41212 452 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 OR3A4PP47883 348 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 ZNF273Q14593 569 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 C4orf48Q5BLP8 95 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 UBE2NLQ5JXB2 153 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 PLCXD3Q63HM9 321 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 TMEM42Q69YG0 159 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 CALHM1Q8IU99 346 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 LGALS14Q8TCE9 139 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 GPER1Q99527 375 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 MICU1Q9BPX6 476 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 PAPOLGQ9BWT3 736 aaKnown RBP11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 PPP1R3EQ9H7J1 279 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 HECTD4Q9Y4D8 3996 aa11.59□□□□□ -0.55
HMGXB4-206ENST00000466438 KIAA1109Q2LD37 5005 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 TMEM210A6NLX4 147 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 OR2F2O95006 317 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 CST4P01036 141 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 APOA1P02647 267 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 CD37P11049 281 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 SNRPBP14678 240 aaKnown RBP11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 GLRA1P23415 457 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 ZNF260Q3ZCT1 412 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 C9orf152Q5JTZ5 239 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 C1orf100Q5SVJ3 147 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 BAIAP2L2Q6UXY1 529 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 CCDC190Q86UF4 302 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 SAMD12Q8N8I0 201 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 OR4M1Q8NGD0 313 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 BORCS5Q969J3 196 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 BORCS8Q96FH0 119 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 DIRAS2Q96HU8 199 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 RBM14Q96PK6 669 aaKnown RBP11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 RTL8AQ9BWD3 113 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 GPR173Q9NS66 373 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 RABL2AQ9UBK7 228 aaPredicted RBP11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 RABL2BQ9UNT1 228 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 MPC1Q9Y5U8 109 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 SORL1Q92673 2214 aa11.58□□□□□ -0.56
HMGXB4-206ENST00000466438 LDLRAD4O15165 306 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 HPGDSO60760 199 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 BPNT1O95861 308 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 RBP4P02753 201 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 UBBP0CG47 229 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 ARSBP15848 533 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 PTBP1P26599 531 aaKnown RBP eCLIP11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 CD40LGP29965 261 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 TNFSF8P32971 234 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 FUT6P51993 359 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 DLX6P56179 175 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 AWAT2Q6E213 333 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 KRT74Q7RTS7 529 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 ZDHHC23Q8IYP9 409 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 OR52N4Q8NGI2 321 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 OR8U1Q8NH10 309 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 CHPT1Q8WUD6 406 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 PIGCQ92535 297 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 FAM3DQ96BQ1 224 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 HIST1H2AAQ96QV6 131 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 S100A13Q99584 98 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 GHRLQ9UBU3 117 aa11.57□□□□□ -0.56
HMGXB4-206ENST00000466438 IGKV1-9A0A0C4DH69 117 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 M0QZK8 103 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 CD24P25063 80 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 POU3F4P49335 361 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 RBP2P50120 134 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 INSL3P51460 131 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 ATP1B3P54709 279 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 PRDX4Q13162 271 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 KISS1Q15726 138 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 UBE2V2Q15819 145 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 MOB3CQ70IA8 216 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 MFSD4AQ8N468 514 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 COMMD1Q8N668 190 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 MIXL1Q9H2W2 232 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 MRPS28Q9Y2Q9 187 aaKnown RBP11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 RHBDD3Q9Y3P4 386 aa11.56□□□□□ -0.56
HMGXB4-206ENST00000466438 FABP12A6NFH5 140 aa11.55□□□□□ -0.56
HMGXB4-206ENST00000466438 OR5B21A6NL26 309 aa11.55□□□□□ -0.56
HMGXB4-206ENST00000466438 ZNF850A8MQ14 1090 aa11.55□□□□□ -0.56
HMGXB4-206ENST00000466438 SCGNO76038 276 aa11.55□□□□□ -0.56
HMGXB4-206ENST00000466438 BRS3P32247 399 aa11.55□□□□□ -0.56
HMGXB4-206ENST00000466438 CLDN12P56749 244 aa11.55□□□□□ -0.56
HMGXB4-206ENST00000466438 P2RY14Q15391 338 aa11.55□□□□□ -0.56
HMGXB4-206ENST00000466438 DEFB136Q30KP8 78 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 568.8 ms