RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 KCTD20Q7Z5Y7 419 aa11.27□□□□□ -0.6
CXCR4-203ENST00000466288 LHFPL3Q86UP9 236 aa11.27□□□□□ -0.6
CXCR4-203ENST00000466288 Q8IYB0 196 aa11.27□□□□□ -0.6
CXCR4-203ENST00000466288 MINDY2Q8NBR6 621 aa11.27□□□□□ -0.6
CXCR4-203ENST00000466288 C4orf3Q8WVX3 66 aa11.27□□□□□ -0.6
CXCR4-203ENST00000466288 MOB1AQ9H8S9 216 aa11.27□□□□□ -0.6
CXCR4-203ENST00000466288 OR52A1Q9UKL2 312 aa11.27□□□□□ -0.6
CXCR4-203ENST00000466288 GTF2A1LQ9UNN4 478 aa11.27□□□□□ -0.6
CXCR4-203ENST00000466288 TRBV2A0A0J9YWF9 115 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 SIRPB1O00241 398 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 IGKV1D-33P01593 117 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 IGKV1-33P01594 117 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 MRPL3P09001 348 aaKnown RBP11.26□□□□□ -0.61
CXCR4-203ENST00000466288 BCL3P20749 454 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 CCL1P22362 96 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 GPR12P47775 334 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 VEGFCP49767 419 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 FUT6P51993 359 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 PPP5CP53041 499 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 CFHR3Q02985 330 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 FAM27D1Q5T7N8 215 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 BCL2L15Q5TBC7 163 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 FAM58AQ8N1B3 248 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 OR11H1Q8NG94 326 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 OR4D6Q8NGJ1 314 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 OR9G1Q8NH87 305 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 ASB17Q8WXJ9 295 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 AP3S1Q92572 193 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 CNN2Q99439 309 aaKnown RBP11.26□□□□□ -0.61
CXCR4-203ENST00000466288 ALG8Q9BVK2 526 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 ABCG5Q9H222 651 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 ADGRL4Q9HBW9 690 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 EXOSC4Q9NPD3 245 aaKnown RBP11.26□□□□□ -0.61
CXCR4-203ENST00000466288 IKZF2Q9UKS7 526 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 R4GMQ9 66 aa11.26□□□□□ -0.61
CXCR4-203ENST00000466288 ODAMA1E959 279 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 MAGEB4O15481 346 aaPredicted RBP11.25□□□□□ -0.61
CXCR4-203ENST00000466288 PRKACAP17612 351 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 SNU13P55769 128 aaKnown RBP11.25□□□□□ -0.61
CXCR4-203ENST00000466288 CCDC58Q4VC31 144 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 SPIN3Q5JUX0 258 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 OR2G6Q5TZ20 316 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 PLEKHG7Q6ZR37 379 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 MS4A15Q8N5U1 240 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 PHYHIPQ92561 330 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 KIRREL1Q96J84 757 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 GON7Q9BXV9 100 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 TXNL4BQ9NX01 149 aaKnown RBP11.25□□□□□ -0.61
CXCR4-203ENST00000466288 AMMECR1Q9Y4X0 333 aaPredicted RBP11.25□□□□□ -0.61
CXCR4-203ENST00000466288 TMEM14AQ9Y6G1 99 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 FUOMA2VDF0 154 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 J3QR06 171 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 OR2H2O95918 312 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 SERPINA3P01011 423 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 NFYBP25208 207 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 EBI3Q14213 229 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 ZNF429Q86V71 674 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 TGIF2LXQ8IUE1 241 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 OR8H3Q8N146 312 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 SLC25A46Q96AG3 418 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 COQ2Q96H96 371 aa11.25□□□□□ -0.61
CXCR4-203ENST00000466288 SORL1Q92673 2214 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 ZNF729A6NN14 1252 aaPredicted RBP11.24□□□□□ -0.61
CXCR4-203ENST00000466288 TMEM127O75204 238 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 IGHG4P01861 327 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 CSN2P05814 226 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 GP9P14770 177 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 SPNP16150 400 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 PSMB8P28062 276 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 RAB7AP51149 207 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 GBX2P52951 348 aaPredicted RBP11.24□□□□□ -0.61
CXCR4-203ENST00000466288 MADCAM1Q13477 382 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 MFSD4AQ8N468 514 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 Q8N9W7 124 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 OR10H4Q8NGA5 316 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 MYOZ3Q8TDC0 251 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 LEAP2Q969E1 77 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 BORCS8Q96FH0 119 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 CHST5Q9GZS9 411 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 LIN7CQ9NUP9 197 aaKnown RBP11.24□□□□□ -0.61
CXCR4-203ENST00000466288 RYR1P21817 5038 aa11.24□□□□□ -0.61
CXCR4-203ENST00000466288 KBTBD11-OT1A0A1B0GTJ5 212 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 NCBP2LA6PVI3 153 aaKnown RBP11.23□□□□□ -0.61
CXCR4-203ENST00000466288 H3BSH0 61 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 SH2D1BO14796 132 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 LDLRAD4O15165 306 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 GATBO75879 557 aaKnown RBP11.23□□□□□ -0.61
CXCR4-203ENST00000466288 IGHV3-7P01780 117 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 OR8U8P0C7N1 319 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 CGB3P0DN86 165 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 CGB7P0DN87 165 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 CELP19835 753 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 RGS21Q2M5E4 152 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 KRBOX4Q5JUW0 171 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 SPANXN2Q5MJ10 180 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 TPRA1Q86W33 373 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 Q8N6K4 173 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 PPP1R14BQ96C90 147 aa11.23□□□□□ -0.61
CXCR4-203ENST00000466288 EAF1Q96JC9 268 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms