RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 KIAA1324LA8MWY0 1029 aaPredicted RBP10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 NR2C1P13056 603 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 LBX1P52954 281 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 HLA-BQ31612 363 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 C9orf135Q5VTT2 229 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 YRDCQ86U90 279 aaKnown RBP10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 OR1P1Q8NH06 330 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 SCGB1C1Q8TD33 95 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 WNT5BQ9H1J7 359 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 PROK2Q9HC23 129 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 FREM1Q5H8C1 2179 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 TCAPO15273 167 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 OR4A8P0C604 315 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 GPM6AP51674 278 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 FBXO46Q6PJ61 603 aaPredicted RBP10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 SYT13Q7L8C5 426 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 FAM185AQ8N0U4 392 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 OR5R1Q8NH85 324 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 OR2V1Q8NHB1 315 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 SMIM7Q9BQ49 75 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 TMEM38BQ9NVV0 291 aa10.76□□□□□ -0.69
CLCNKA-204ENST00000464764 TRAV1-1A0A0B4J248 108 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 CLEC18AA5D8T8 446 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 OR6C6A6NF89 314 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 HS3ST1O14792 307 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 OPN1MWP04001 364 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 PFN1P07737 140 aaKnown RBP10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 OPN1MW2P0DN77 364 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 OPN1MW3P0DN78 364 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 PAX1P15863 534 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 RPS16P62249 146 aaKnown RBP10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 CEACAM16Q2WEN9 425 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 RABEPKQ7Z6M1 372 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 CLEC18CQ8NCF0 446 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 C2orf88Q9BSF0 95 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 SEMA5BQ9P283 1151 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 CACNG5Q9UF02 275 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 IGKV1D-33P01593 117 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 IGKV1-33P01594 117 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 DEFA4P12838 97 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 CD81P60033 236 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 GNB2P62879 340 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 OR8B8Q15620 311 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 CPEB3Q8NE35 698 aaKnown RBP10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 OR10G4Q8NGN3 311 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 IL1F10Q8WWZ1 152 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 TMEM242Q9NWH2 141 aa10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 ERRFI1Q9UJM3 462 aaPredicted RBP10.75□□□□□ -0.69
CLCNKA-204ENST00000464764 COL6A3P12111 3177 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 A0A1W2PPQ1 181 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 LRRC3CA6NJW4 275 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 ZNF737O75373 536 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 IGKV1-39P01597 117 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 IGKV1D-39P04432 117 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 FGF7P21781 194 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 PNRC1Q12796 327 aaPredicted RBP10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 PRR18Q8N4B5 295 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 RDH5Q92781 318 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 OR2H1Q9GZK4 316 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 AURKAIP1Q9NWT8 199 aaPredicted RBP10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 PTRH2Q9Y3E5 179 aaKnown RBP10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 A0A1B0GUS0 222 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 MAP1LC3B2A6NCE7 125 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 MKRN2OSH3BPM6 223 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 TP53I11O14683 189 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 DFFBO76075 338 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 NAPSAO96009 420 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 SERPINE2P07093 398 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 ZNF16P17020 682 aaPredicted RBP10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 F2RP25116 425 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 ABLIM2Q6H8Q1 611 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 ZDHHC23Q8IYP9 409 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 ZNF525Q8N782 197 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 OR4C12Q96R67 309 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 MAP1LC3BQ9GZQ8 125 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 IL36GQ9NZH8 169 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 MTCH1Q9NZJ7 389 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 PRSS50Q9UI38 385 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 FUT9Q9Y231 359 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 R4GN57 208 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 DOCK11Q5JSL3 2073 aa10.74□□□□□ -0.69
CLCNKA-204ENST00000464764 A0A0G2JMM0 328 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 ZNF816-ZNF321PA0A0X1KG74 233 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 A0A1W2PPB8 328 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 A0A1W2PRS3 328 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 KIR3DP1A8MWS1 328 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 DVL1O14640 695 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 TUSC2O75896 110 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 VAMP5O95183 116 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 LIFP15018 202 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 MDH2P40926 338 aaKnown RBP10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 SPANXN5Q5MJ07 72 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 NCR3LG1Q68D85 454 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 WDR74Q6RFH5 385 aaPredicted RBP10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 PCSK4Q6UW60 755 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 OR56B2PQ8NGI1 322 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 OR5D13Q8NGL4 314 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 DDA1Q9BW61 102 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 SRD5A3Q9H8P0 318 aa10.73□□□□□ -0.69
CLCNKA-204ENST00000464764 PSENENQ9NZ42 101 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms