RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CHATP28329 748 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 BRS3P32247 399 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 P2RY14Q15391 338 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 NKAPLQ5M9Q1 402 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 SLC16A12Q6ZSM3 486 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 ZNF367Q7RTV3 350 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 C6orf201Q7Z4U5 140 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 PRR18Q8N4B5 295 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 OR52M1Q8NGK5 317 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 OR1L1Q8NH94 360 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 RPEQ96AT9 228 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 FAAP24Q9BTP7 215 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 GFOD1Q9NXC2 390 aa10.37□□□□□ -0.75
XRN1-203ENST00000463916 SHISA3A0PJX4 238 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 SLC31A2O15432 143 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 HBZP02008 142 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 GLAP06280 429 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 PSMA1P25786 263 aaKnown RBP10.36□□□□□ -0.75
XRN1-203ENST00000463916 ZNF134P52741 427 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 CLDN12P56749 244 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 MADCAM1Q13477 382 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 Q6ZPA2 131 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 DRAM1Q8N682 238 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 OR6M1Q8NGM8 313 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 OR10X1Q8NGY0 326 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 OR56B4Q8NH76 319 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 KCNG3Q8TAE7 436 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 MRPL30Q8TCC3 161 aaKnown RBP10.36□□□□□ -0.75
XRN1-203ENST00000463916 CFHR4Q92496 578 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 TOMM40LQ969M1 308 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 RBMXL1Q96E39 390 aaKnown RBP10.36□□□□□ -0.75
XRN1-203ENST00000463916 TM2D1Q9BX74 207 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 TMEM59Q9BXS4 323 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 PRSS22Q9GZN4 317 aa10.36□□□□□ -0.75
XRN1-203ENST00000463916 MBNL3Q9NUK0 354 aaKnown RBP10.36□□□□□ -0.75
XRN1-203ENST00000463916 SH2D7A6NKC9 451 aaPredicted RBP10.35□□□□□ -0.75
XRN1-203ENST00000463916 FAM90A9PA6NNJ1 464 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 OOSP1A8MZH6 123 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 SLC17A2O00624 439 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 ARL6IP5O75915 188 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 TSPAN15O95858 294 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 BPNT1O95861 308 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 GABARAPL2P60520 117 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 HERPUD1Q15011 391 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 CCDC144NLQ6NUI1 221 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 SPARTQ8N0X7 666 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 WIPF2Q8TF74 440 aaPredicted RBP10.35□□□□□ -0.75
XRN1-203ENST00000463916 CAPSLQ8WWF8 208 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 RBM14Q96PK6 669 aaKnown RBP10.35□□□□□ -0.75
XRN1-203ENST00000463916 SLC25A33Q9BSK2 321 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 LPAR5Q9H1C0 372 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 PLGRKTQ9HBL7 147 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 TAF9BQ9HBM6 251 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 AMMECR1Q9Y4X0 333 aaPredicted RBP10.35□□□□□ -0.75
XRN1-203ENST00000463916 NOTCH1P46531 2555 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 M0QZ24 198 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 CA11O75493 328 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 ARSBP15848 533 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 MNDAP41218 407 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 REG1BP48304 166 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 PLA2G7Q13093 441 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 C11orf88Q6PI97 169 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 CD200R1LQ6Q8B3 271 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 ZNF439Q8NDP4 499 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 OR51D1Q8NGF3 324 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 OR10V1Q8NGI7 309 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 WNT10AQ9GZT5 417 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 LIN7BQ9HAP6 207 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 NDUFB11Q9NX14 153 aa10.35□□□□□ -0.75
XRN1-203ENST00000463916 SOCS1O15524 211 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 SNRNP70P08621 437 aaKnown RBP10.34□□□□□ -0.75
XRN1-203ENST00000463916 ARHGDIBP52566 201 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 OR10A3P58181 314 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 ABCA11PQ4W5N1 156 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 CT45A1Q5HYN5 189 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 LINC00311Q8N616 119 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 CT45A3Q8NHU0 189 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 ST6GALNAC6Q969X2 333 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 NEDD4LQ96PU5 975 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
XRN1-203ENST00000463916 SPINT2O43291 252 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 OR2F2O95006 317 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 BLVRBP30043 206 aaPredicted RBP10.34□□□□□ -0.75
XRN1-203ENST00000463916 HNF4GQ14541 408 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 GNMTQ14749 295 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 C6orf183Q5T699 404 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 UBE2UQ5VVX9 321 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 Q6ZTK2 550 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 LYG1Q8N1E2 194 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 FAM89BQ8N5H3 189 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 C8orf31Q8N9H6 132 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 GNG12Q9UBI6 72 aa10.34□□□□□ -0.75
XRN1-203ENST00000463916 TET2Q6N021 2002 aaPredicted RBP10.33□□□□□ -0.76
XRN1-203ENST00000463916 IGHV3-72A0A0B4J1Y9 119 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 FOXI3A8MTJ6 420 aaPredicted RBP10.33□□□□□ -0.76
XRN1-203ENST00000463916 CCRL2O00421 344 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 HSD17B6O14756 317 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 LPLP06858 475 aa10.33□□□□□ -0.76
XRN1-203ENST00000463916 FAM106CPP0CH98 169 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms