RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 RBM39Q14498 530 aaKnown RBP3.86□□□□□ -1.79
CSMD3-205ENST00000462254 AANATQ16613 207 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 CNPY1Q3B7I2 92 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 DMRTC1Q5HYR2 192 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 DDI2Q5TDH0 399 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF544Q6NX49 715 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 XKRXQ6PP77 449 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 GDPGP1Q6ZNW5 385 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 CEACAM19Q7Z692 300 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 NR2C2APQ86WQ0 139 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 TMEM17Q86X19 198 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 FAM58AQ8N1B3 248 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 MAPKAPK5-AS1Q8N8E1 139 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 ASCC1Q8N9N2 400 aaKnown RBP3.86□□□□□ -1.79
CSMD3-205ENST00000462254 STXBP6Q8NFX7 210 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 OR52H1Q8NGJ2 320 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 OR13C3Q8NGS6 347 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 C8orf46Q8TAG6 207 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 LINC01560Q8TB33 94 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 SLC25A40Q8TBP6 338 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 DYNC2LI1Q8TCX1 351 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 GPR148Q8TDV2 347 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 SCARB1Q8WTV0 552 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 TMEM106AQ96A25 262 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 APOBEC3DQ96AK3 386 aaPredicted RBP3.86□□□□□ -1.79
CSMD3-205ENST00000462254 C10orf35Q96D05 121 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 DGCR14Q96DF8 476 aaKnown RBP3.86□□□□□ -1.79
CSMD3-205ENST00000462254 MUCL1Q96DR8 90 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 ADAT3Q96EY9 351 aaPredicted RBP3.86□□□□□ -1.79
CSMD3-205ENST00000462254 REEP6Q96HR9 211 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF479Q96JC4 524 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 MED18Q9BUE0 208 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 C20orf24Q9BUV8 137 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 ST6GALNAC5Q9BVH7 336 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 DCSTAMPQ9H295 470 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 KCNJ16Q9NPI9 418 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF275Q9NSD4 429 aaPredicted RBP3.86□□□□□ -1.79
CSMD3-205ENST00000462254 GHRLQ9UBU3 117 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 POLDIP2Q9Y2S7 368 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 RHBDD3Q9Y3P4 386 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 PKDREJQ9NTG1 2253 aa3.86□□□□□ -1.79
CSMD3-205ENST00000462254 ABCA4P78363 2273 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 DHRS3O75911 302 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 NXPH2O95156 264 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 CDRT1O95170 752 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 IGF1P05019 195 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 IGFBP3P17936 291 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-205ENST00000462254 LOXP28300 417 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-205ENST00000462254 SDC2P34741 201 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 MPV17P39210 176 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 DDOSTP39656 456 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 SERPINB10P48595 397 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 AMTP48728 403 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 EFNB2P52799 333 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 CAV3P56539 151 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 OR10A3P58181 314 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 PLP1P60201 277 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 CTAG1AP78358 180 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 MXD1Q05195 221 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 BSPH1Q075Z2 132 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 SLAQ13239 276 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 COTL1Q14019 142 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 OR8B8Q15620 311 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 HSD17B12Q53GQ0 312 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 NCMAPQ5T1S8 102 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 FBXW12Q6X9E4 464 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 Q6ZRG5 221 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 USP43Q70EL4 1123 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 PGAP1Q75T13 922 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 MRPL21Q7Z2W9 205 aaKnown RBP3.85□□□□□ -1.79
CSMD3-205ENST00000462254 LRRTM1Q86UE6 522 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 OR5AS1Q8N127 324 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 KBTBD8Q8NFY9 601 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 OR51A2Q8NGJ7 313 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 OR13C9Q8NGT0 318 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 NRGNQ92686 78 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 FGGYQ96C11 551 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 URB1-AS1Q96HZ7 61 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 LURAP1Q96LR2 239 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 KCTD7Q96MP8 289 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 NKX3-1Q99801 234 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-205ENST00000462254 SLC25A33Q9BSK2 321 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 DCUN1D5Q9BTE7 237 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 BARHL1Q9BZE3 327 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 OR2J1Q9GZK6 312 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 PRSS22Q9GZN4 317 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 CXXC4Q9H2H0 198 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 SP140LQ9H930 580 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 TAS2R4Q9NYW5 299 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 MTCH1Q9NZJ7 389 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF391Q9UJN7 358 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 PITPNC1Q9UKF7 332 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 ROS1P08922 2347 aa3.85□□□□□ -1.79
CSMD3-205ENST00000462254 DOPEY2Q9Y3R5 2298 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 ZNF462Q96JM2 2506 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 YLPM1P49750 1951 aaKnown RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 UBR5O95071 2799 aaPredicted RBP3.84□□□□□ -1.79
CSMD3-205ENST00000462254 LRBAP50851 2863 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 DCHS2Q6V1P9 2916 aa3.84□□□□□ -1.79
CSMD3-205ENST00000462254 TRAV1-2A0A0B4J238 106 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms