RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 MOSP00540 346 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 IGFBP3P17936 291 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-216ENST00000461187 IL3RAP26951 378 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 CDX1P47902 265 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-216ENST00000461187 GP2P55259 537 aaKnown RBP11.52□□□□□ -0.57
SMPD4-216ENST00000461187 RAB25P57735 213 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 FOXE3Q13461 319 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 KIR2DS1Q14954 304 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 Q3ZCU0 254 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 SLC22A6Q4U2R8 563 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 CXorf66Q5JRM2 361 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-216ENST00000461187 SLC25A48Q6ZT89 311 aaKnown RBP11.52□□□□□ -0.57
SMPD4-216ENST00000461187 ZNF439Q8NDP4 499 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 NEK7Q8TDX7 302 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 SMIM19Q96E16 107 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 RBMXL1Q96E39 390 aaKnown RBP11.52□□□□□ -0.57
SMPD4-216ENST00000461187 S1PR3Q99500 378 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 ZNF184Q99676 751 aaPredicted RBP11.52□□□□□ -0.57
SMPD4-216ENST00000461187 GON7Q9BXV9 100 aa11.52□□□□□ -0.57
SMPD4-216ENST00000461187 STAB2Q8WWQ8 2551 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 TRBV5-5A0A0J9YX44 114 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 C12orf77C9JDV5 145 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 AIPO00170 330 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 RAMP3O60896 148 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 ZNF780AO75290 641 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-216ENST00000461187 GPX5O75715 221 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 LALBAP00709 142 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 ELANEP08246 267 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 GTF2F2P13984 249 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 DCKP27707 260 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 VHLP40337 213 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 LUMP51884 338 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-216ENST00000461187 ZNF134P52741 427 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 ZNF137PP52743 207 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 F2RL1P55085 397 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 CFHR3Q02985 330 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 RIPK1Q13546 671 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 TMPRSS11AQ6ZMR5 421 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 FAM71E2Q8N5Q1 922 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 OR8U1Q8NH10 309 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 RASL11BQ9BPW5 248 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 HSPB9Q9BQS6 159 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 BABAM2Q9NXR7 383 aa11.51□□□□□ -0.57
SMPD4-216ENST00000461187 RCC2Q9P258 522 aaKnown RBP11.51□□□□□ -0.57
SMPD4-216ENST00000461187 LSM4Q9Y4Z0 139 aaKnown RBP11.51□□□□□ -0.57
SMPD4-216ENST00000461187 IGHG4P01861 327 aa11.5□□□□□ -0.57
SMPD4-216ENST00000461187 RPS11P62280 158 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMPD4-216ENST00000461187 GPR176Q14439 515 aa11.5□□□□□ -0.57
SMPD4-216ENST00000461187 CT45A1Q5HYN5 189 aa11.5□□□□□ -0.57
SMPD4-216ENST00000461187 SYT6Q5T7P8 510 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-216ENST00000461187 STX19Q8N4C7 294 aa11.5□□□□□ -0.57
SMPD4-216ENST00000461187 OR8H1Q8NGG4 311 aa11.5□□□□□ -0.57
SMPD4-216ENST00000461187 OR5M8Q8NGP6 311 aa11.5□□□□□ -0.57
SMPD4-216ENST00000461187 CT45A3Q8NHU0 189 aa11.5□□□□□ -0.57
SMPD4-216ENST00000461187 GHSRQ92847 366 aa11.5□□□□□ -0.57
SMPD4-216ENST00000461187 S100A14Q9HCY8 104 aa11.5□□□□□ -0.57
SMPD4-216ENST00000461187 TRAV8-7A0A075B6U6 113 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 TXNL1O43396 289 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 RRP9O43818 475 aaKnown RBP11.49□□□□□ -0.57
SMPD4-216ENST00000461187 HBZP02008 142 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 NHLRC4P0CG21 123 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-216ENST00000461187 SOX6P35712 828 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 C9orf66Q5T8R8 295 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 DMKNQ6E0U4 476 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-216ENST00000461187 C10orf67Q8IYJ2 551 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 GAPTQ8N292 157 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 PQLC1Q8N2U9 271 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 OR10V1Q8NGI7 309 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 OR4K15Q8NH41 348 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 OR1L1Q8NH94 360 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 MUL1Q969V5 352 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 PRR25Q96S07 402 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 SPACA1Q9HBV2 294 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 ETAA1Q9NY74 926 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 GNG12Q9UBI6 72 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 CLEC2DQ9UHP7 191 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 SCOCQ9UIL1 159 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 ZNF580Q9UK33 172 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 TRAPPC2LQ9UL33 140 aa11.49□□□□□ -0.57
SMPD4-216ENST00000461187 DIMT1Q9UNQ2 313 aaKnown RBP11.49□□□□□ -0.57
SMPD4-216ENST00000461187 MCRIP1C9JLW8 97 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 SPINT2O43291 252 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 IGF1P05019 195 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 RCC1P18754 421 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-216ENST00000461187 FSTP19883 344 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 VDAC1P21796 283 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 PSMB8P28062 276 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 FHL3Q13643 280 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 TMEM30BQ3MIR4 351 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 Q499Y3 187 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 NKAPLQ5M9Q1 402 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 C6orf183Q5T699 404 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 RAB12Q6IQ22 244 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 GLIPR1L1Q6UWM5 242 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 ZNF555Q8NEP9 628 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 C4orf3Q8WVX3 66 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 MRPS24Q96EL2 167 aaKnown RBP11.48□□□□□ -0.57
SMPD4-216ENST00000461187 CYYR1Q96J86 154 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 PGLYRP3Q96LB9 341 aa11.48□□□□□ -0.57
SMPD4-216ENST00000461187 KCTD7Q96MP8 289 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms