RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SPRNQ5BIV9 151 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 ZNF818PQ6ZRF7 136 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 SSX9Q7RTT3 188 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 LGI3Q8N145 548 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 CA5BP1Q8WTZ4 195 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 H1FXQ92522 213 aaKnown RBP7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 RBMXL1Q96E39 390 aaKnown RBP7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 C2orf50Q96LR7 162 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 C12orf57Q99622 126 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 MRPL37Q9BZE1 423 aaKnown RBP7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 MLXQ9UH92 298 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 TRAV14DV4A0A0A6YYC5 116 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 C3orf85A0A1B0GTC6 90 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 VSTM5A8MXK1 200 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 IQCF6A8MYZ5 107 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 K7EPK0 472 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 APOC3P02656 99 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 MSMPQ1L6U9 139 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 AKIRIN2Q53H80 203 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 FAM71E2Q8N5Q1 922 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 NEUROG1Q92886 237 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 TP53RKQ96S44 253 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 DCAF16Q9NXF7 216 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 WASF3Q9UPY6 502 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 KMT2EQ8IZD2 1858 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 G3V3Q6 166 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 MPPED1O15442 326 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 OR4A8P0C604 315 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 ZNF816Q0VGE8 651 aaPredicted RBP7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 GNMTQ14749 295 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 Q8IYB0 196 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 GSX2Q9BZM3 304 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 MS4A7Q9GZW8 240 aaPredicted RBP7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 IL36GQ9NZH8 169 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 PSG11Q9UQ72 335 aa7.91□□□□□ -1.14
NUDCD3-203ENST00000460110 GPR31O00270 319 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 KRASP01116 189 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 CGAP01215 116 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 PRH1P02810 166 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 GLAP06280 429 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 PRDX2P32119 198 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 LPCAT3Q6P1A2 487 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 WDR82Q6UXN9 313 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 ACOT7LQ6ZUV0 252 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 TGIF2LYQ8IUE0 185 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 SLC35G3Q8N808 338 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 C1orf162Q8NEQ5 155 aaPredicted RBP7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 MRPL30Q8TCC3 161 aaKnown RBP7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 GALMQ96C23 342 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 ABHD14BQ96IU4 210 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 CCL13Q99616 98 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 PKIBQ9C010 78 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 TMEM30CPA0ZSE6 113 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 MSGN1A6NI15 193 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 ZNF98A6NK75 572 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 FOXI3A8MTJ6 420 aaPredicted RBP7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 TMPRSS2O15393 492 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 ADAM20O43506 726 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 SSSCA1O60232 199 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 PTAFRP25105 342 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 TIMP3P35625 211 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 LINC00205P59089 165 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 DEFA5Q01523 94 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 ASCL4Q6XD76 172 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 LHFPL1Q86WI0 220 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 HSD17B11Q8NBQ5 300 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 HINT2Q9BX68 163 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 PFDN2Q9UHV9 154 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 NPTNQ9Y639 398 aa7.9□□□□□ -1.14
NUDCD3-203ENST00000460110 CST7O76096 145 aa7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 GYPAP02724 150 aa7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 HEXAP06865 529 aa7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 PGA5P0DJD9 388 aa7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 HOXB1P14653 301 aaPredicted RBP7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 POLR2GP62487 172 aaKnown RBP eCLIP7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 HLA-DRB3P79483 266 aa7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 Q6ZPA2 131 aa7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 ZCCHC14Q8WYQ9 949 aaKnown RBP7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 NRIP2Q9BQI9 281 aa7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 OR2D2Q9H210 308 aa7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 RAB18Q9NP72 206 aa7.9□□□□□ -1.15
NUDCD3-203ENST00000460110 LGALS8O00214 317 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 ST8SIA5O15466 376 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 PET100P0DJ07 73 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 EGR1P18146 543 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 GLRXP35754 106 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 ID4P47928 161 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 RPS23P62266 143 aaKnown RBP7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 TLE1Q04724 770 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 HERPUD1Q15011 391 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 FAHD2BQ6P2I3 314 aaPredicted RBP7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 OR52M1Q8NGK5 317 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 TCTEX1D2Q8WW35 142 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 MOB3AQ96BX8 217 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 FAHD2AQ96GK7 314 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 USP9YO00507 2555 aaPredicted RBP7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 PTPN13Q12923 2485 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 TRAV20A0A0B4J274 112 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 IGKV1-6A0A0C4DH72 117 aa7.89□□□□□ -1.15
NUDCD3-203ENST00000460110 A0A0D9SG52 128 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms